Variant report

Variant rs6702148
Chromosome Location chr1:145118378-145118379
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145097800-145130000 Weak transcription Right Ventricle heart
2 chr1:145098200-145122400 Weak transcription Brain Substantia Nigra brain
3 chr1:145099800-145119400 Weak transcription Brain Cingulate Gyrus brain
4 chr1:145099800-145122400 Weak transcription Brain Germinal Matrix brain
5 chr1:145109200-145118400 Strong transcription Primary T cells fromperipheralblood blood
6 chr1:145110200-145122000 Weak transcription Brain Hippocampus Middle brain
7 chr1:145110400-145119600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:145110800-145118400 Strong transcription Primary T helper cells fromperipheralblood blood
9 chr1:145111200-145118400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:145111600-145118400 Strong transcription Primary T helper cells PMA-I stimulated --
11 chr1:145111600-145122600 Weak transcription Spleen Spleen
12 chr1:145112600-145119600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr1:145113200-145129600 Weak transcription Fetal Heart heart
14 chr1:145113800-145121600 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:145114400-145118400 Genic enhancers HSMM muscle
16 chr1:145114800-145118400 Strong transcription Primary hematopoietic stem cells blood
17 chr1:145114800-145120200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:145115000-145119600 Weak transcription Fetal Brain Male brain
19 chr1:145115200-145130000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:145115400-145118400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:145115400-145118400 Strong transcription NH-A brain
22 chr1:145115400-145118400 Genic enhancers Osteobl bone
23 chr1:145115600-145118400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:145115600-145118400 Strong transcription Liver Liver
25 chr1:145115600-145118400 Strong transcription Fetal Intestine Large intestine
26 chr1:145115600-145120200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:145115600-145128200 Weak transcription HMEC breast
28 chr1:145115800-145118400 Genic enhancers Primary monocytes fromperipheralblood blood
29 chr1:145115800-145118400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:145115800-145118400 Genic enhancers Adipose Nuclei Adipose
31 chr1:145115800-145118400 Strong transcription HUVEC blood vessel
32 chr1:145116200-145118600 Weak transcription Fetal Muscle Trunk muscle
33 chr1:145116200-145119000 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:145116200-145119600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:145116200-145119600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr1:145116200-145121600 Weak transcription H9 Cell Line embryonic stem cell
37 chr1:145116200-145130000 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr1:145116400-145130000 Weak transcription Thymus Thymus
39 chr1:145116600-145120800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:145116800-145118400 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:145116800-145118400 Strong transcription Placenta Placenta
42 chr1:145116800-145119000 Strong transcription Primary T cells from cord blood blood
43 chr1:145116800-145119600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:145116800-145119600 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr1:145116800-145119800 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:145116800-145120800 Weak transcription Fetal Muscle Leg muscle
47 chr1:145116800-145128200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:145116800-145128200 Weak transcription Colon Smooth Muscle Colon
49 chr1:145116800-145129600 Weak transcription Fetal Thymus thymus
50 chr1:145117000-145118400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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