Variant report

Variant rs6704220
Chromosome Location chr1:228346872-228346873
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228332800-228349800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:228333800-228350400 Weak transcription Primary B cells from cord blood blood
3 chr1:228336800-228350200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:228337800-228349800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:228338000-228349200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:228338000-228349600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr1:228338200-228352400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:228338400-228349200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:228339400-228352600 Weak transcription Brain Anterior Caudate brain
10 chr1:228339600-228349000 Weak transcription NHLF lung
11 chr1:228339800-228349400 Weak transcription Brain Angular Gyrus brain
12 chr1:228340000-228349200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:228340600-228349600 Weak transcription Colon Smooth Muscle Colon
14 chr1:228342600-228350000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:228343000-228347200 Weak transcription Brain Cingulate Gyrus brain
16 chr1:228343200-228349200 Weak transcription K562 blood
17 chr1:228343400-228347400 Weak transcription NHEK skin
18 chr1:228343400-228352400 Weak transcription A549 lung
19 chr1:228344200-228347200 Bivalent Enhancer Fetal Muscle Trunk muscle
20 chr1:228344200-228348400 Weak transcription Gastric stomach
21 chr1:228344200-228348400 Weak transcription Hela-S3 cervix
22 chr1:228344200-228349000 Weak transcription Brain Substantia Nigra brain
23 chr1:228344200-228352200 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:228345200-228349200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr1:228345200-228349200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:228345200-228349200 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:228345400-228349200 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr1:228345400-228349200 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr1:228345400-228349400 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr1:228345400-228349800 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr1:228345600-228347000 Bivalent Enhancer Fetal Stomach stomach
32 chr1:228345600-228347200 Bivalent Enhancer Fetal Muscle Leg muscle
33 chr1:228345800-228347400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:228345800-228348600 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr1:228345800-228349000 Weak transcription Primary T cells fromperipheralblood blood
36 chr1:228345800-228349400 Weak transcription Primary T cells from cord blood blood
37 chr1:228345800-228349400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:228345800-228349800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:228345800-228351400 Enhancers Esophagus oesophagus
40 chr1:228346000-228347200 Bivalent Enhancer Placenta Amnion Placenta Amnion
41 chr1:228346000-228349400 Weak transcription Primary hematopoietic stem cells blood
42 chr1:228346200-228347800 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
43 chr1:228346200-228348600 Weak transcription Fetal Thymus thymus
44 chr1:228346200-228349200 Weak transcription HMEC breast
45 chr1:228346200-228349800 Weak transcription Thymus Thymus
46 chr1:228346400-228347000 Enhancers Stomach Smooth Muscle stomach
47 chr1:228346400-228347400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
48 chr1:228346400-228349200 Weak transcription Pancreas Pancrea
49 chr1:228346400-228349600 Weak transcription Right Atrium heart
50 chr1:228346600-228347000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin

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