The 2.0 version of rSNPBase

Variant report

Variant rs6705567
Chromosome Location chr2:55320173-55320174
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55312000-55321200 Weak transcription Lung lung
2 chr2:55315400-55320200 Weak transcription Muscle Satellite Cultured Cells --
3 chr2:55315400-55320200 Weak transcription Brain Angular Gyrus brain
4 chr2:55315400-55320200 Weak transcription Brain Cingulate Gyrus brain
5 chr2:55315400-55320600 Weak transcription Brain Hippocampus Middle brain
6 chr2:55315400-55320800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr2:55315400-55323600 Weak transcription HSMMtube muscle
8 chr2:55316000-55320600 Weak transcription Brain Substantia Nigra brain
9 chr2:55316000-55322800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr2:55316000-55323800 Weak transcription NHDF-Ad bronchial
11 chr2:55316800-55327200 Enhancers Primary neutrophils fromperipheralblood blood
12 chr2:55317200-55323800 Weak transcription Fetal Muscle Leg muscle
13 chr2:55317400-55322000 Enhancers Primary monocytes fromperipheralblood blood
14 chr2:55318400-55320600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr2:55318400-55323600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr2:55318400-55323600 Weak transcription Hela-S3 cervix
17 chr2:55318400-55329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr2:55318600-55322800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr2:55319200-55321000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr2:55319400-55320200 Enhancers Primary T helper cells fromperipheralblood blood
21 chr2:55319400-55320200 Enhancers Stomach Mucosa stomach
22 chr2:55319400-55321000 Enhancers HMEC breast
23 chr2:55319400-55321600 Enhancers K562 blood
24 chr2:55319400-55321800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr2:55319400-55321800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr2:55319400-55322200 Enhancers Monocytes-CD14+_RO01746 blood
27 chr2:55319600-55320200 Enhancers Primary B cells from cord blood blood
28 chr2:55319600-55320200 Enhancers Primary T helper cells PMA-I stimulated --
29 chr2:55319600-55321600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr2:55319600-55322000 Enhancers NHEK skin
31 chr2:55319600-55322200 Enhancers HUVEC blood vessel
32 chr2:55319600-55322400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr2:55319800-55321000 Enhancers Fetal Heart heart
34 chr2:55319800-55321600 Enhancers A549 lung
35 chr2:55319800-55324600 Weak transcription Fetal Intestine Small intestine
36 chr2:55320000-55320200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:55320000-55320800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr2:55320000-55321000 Enhancers NH-A brain
39 chr2:55320000-55321200 Enhancers NHLF lung
40 chr2:55320000-55321400 Weak transcription Primary hematopoietic stem cells blood
41 chr2:55320000-55321600 Enhancers Osteobl bone
42 chr2:55320000-55327200 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015