The 2.0 version of rSNPBase

Variant report

Variant rs6710060
Chromosome Location chr2:179239679-179239680
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179183800-179247800 Weak transcription Psoas Muscle Psoas
2 chr2:179199000-179241200 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr2:179199600-179240400 Weak transcription Fetal Stomach stomach
4 chr2:179201800-179240000 Weak transcription Stomach Smooth Muscle stomach
5 chr2:179201800-179240400 Weak transcription Fetal Muscle Trunk muscle
6 chr2:179201800-179240400 Weak transcription HSMMtube muscle
7 chr2:179201800-179253600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr2:179201800-179268200 Weak transcription HSMM muscle
9 chr2:179202400-179248000 Weak transcription NH-A brain
10 chr2:179209200-179253000 Weak transcription Esophagus oesophagus
11 chr2:179210800-179257200 Weak transcription Pancreas Pancrea
12 chr2:179215200-179248800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr2:179215600-179239800 Weak transcription Brain Anterior Caudate brain
14 chr2:179217400-179240400 Weak transcription Aorta Aorta
15 chr2:179217400-179248400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr2:179217600-179241800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:179218200-179240000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr2:179219000-179248000 Weak transcription Left Ventricle heart
19 chr2:179224800-179239800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr2:179225000-179257800 Weak transcription Lung lung
21 chr2:179226600-179257200 Weak transcription Gastric stomach
22 chr2:179227000-179240600 Weak transcription Brain Angular Gyrus brain
23 chr2:179228800-179247200 Weak transcription HMEC breast
24 chr2:179229600-179240800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr2:179232000-179243800 Weak transcription Brain Cingulate Gyrus brain
26 chr2:179232000-179254200 Weak transcription Hela-S3 cervix
27 chr2:179232800-179240400 Weak transcription Fetal Brain Female brain
28 chr2:179233000-179248200 Weak transcription Fetal Brain Male brain
29 chr2:179233200-179240400 Weak transcription Ovary ovary
30 chr2:179235600-179251600 Weak transcription Muscle Satellite Cultured Cells --
31 chr2:179237400-179252200 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr2:179237800-179241000 Weak transcription Fetal Muscle Leg muscle
33 chr2:179238400-179247600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr2:179238400-179251400 Weak transcription Fetal Intestine Large intestine
35 chr2:179238600-179242000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr2:179238600-179242600 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr2:179238600-179247800 Weak transcription Brain Hippocampus Middle brain
38 chr2:179239000-179242600 Strong transcription Skeletal Muscle Male skeletal muscle
39 chr2:179239200-179240000 Enhancers NHEK skin
40 chr2:179239400-179240200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:179239600-179240200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:179239600-179242200 Strong transcription Liver Liver
43 chr2:179239600-179242400 Strong transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015