Variant report

Variant rs67180325
Chromosome Location chr17:20799498-20799499
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20780800-20801600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr17:20782600-20801200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr17:20784600-20799600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr17:20789400-20801800 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr17:20798200-20801200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr17:20798200-20811600 Weak transcription H9 Cell Line embryonic stem cell
7 chr17:20798600-20801200 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr17:20798800-20800200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr17:20798800-20806800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr17:20799000-20799800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
11 chr17:20799000-20800000 Strong transcription H1 Cell Line embryonic stem cell
12 chr17:20799200-20799600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr17:20799200-20799800 Genic enhancers iPS DF 6.9 Cell Line embryonic stem cell
14 chr17:20799200-20800000 Active TSS Fetal Brain Female brain
15 chr17:20799200-20800200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr17:20799400-20799600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr17:20799400-20799600 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
18 chr17:20799400-20799600 Bivalent Enhancer Colonic Mucosa Colon
19 chr17:20799400-20799600 Enhancers Ovary ovary
20 chr17:20799400-20799600 Enhancers Pancreas Pancrea
21 chr17:20799400-20799600 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
22 chr17:20799400-20799600 Enhancers Monocytes-CD14+_RO01746 blood
23 chr17:20799400-20799800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
24 chr17:20799400-20799800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr17:20799400-20799800 Enhancers Gastric stomach
26 chr17:20799400-20800000 Active TSS Muscle Satellite Cultured Cells --

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