Variant report

Variant rs672443
Chromosome Location chr22:20919435-20919436
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20890800-20923000 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr22:20905000-20923000 Strong transcription Primary monocytes fromperipheralblood blood
3 chr22:20907400-20921200 Weak transcription Small Intestine intestine
4 chr22:20908400-20922800 Strong transcription Fetal Intestine Large intestine
5 chr22:20909000-20921000 Strong transcription Rectal Mucosa Donor 29 rectum
6 chr22:20911800-20920600 Genic enhancers Primary T cells fromperipheralblood blood
7 chr22:20911800-20931000 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr22:20912000-20920600 Strong transcription Osteobl bone
9 chr22:20912000-20920800 Strong transcription Duodenum Mucosa Duodenum
10 chr22:20912200-20920200 Strong transcription HSMM muscle
11 chr22:20913200-20919600 Strong transcription Fetal Adrenal Gland Adrenal Gland
12 chr22:20913200-20920800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr22:20913400-20919600 Weak transcription H9 Cell Line embryonic stem cell
14 chr22:20913400-20920800 Weak transcription Right Atrium heart
15 chr22:20913800-20922600 Weak transcription Fetal Brain Male brain
16 chr22:20913800-20942000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr22:20914000-20920000 Strong transcription Thymus Thymus
18 chr22:20914000-20920600 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr22:20914000-20920600 Strong transcription Fetal Stomach stomach
20 chr22:20914000-20920800 Strong transcription Fetal Muscle Trunk muscle
21 chr22:20914000-20920800 Weak transcription Stomach Mucosa stomach
22 chr22:20914000-20921000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr22:20914000-20921000 Weak transcription Fetal Heart heart
24 chr22:20914000-20921800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr22:20914000-20922200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr22:20914000-20922400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr22:20914000-20923000 Strong transcription Primary hematopoietic stem cells short term culture blood
28 chr22:20914000-20923400 Strong transcription Fetal Intestine Small intestine
29 chr22:20914000-20946000 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr22:20914200-20920800 Strong transcription Fetal Muscle Leg muscle
31 chr22:20914400-20919600 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr22:20914400-20919600 Weak transcription H1 Cell Line embryonic stem cell
33 chr22:20914400-20921000 Weak transcription Fetal Kidney kidney
34 chr22:20914400-20934600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr22:20914400-20941800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr22:20914400-20942000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr22:20916200-20920800 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr22:20916200-20920800 Strong transcription Duodenum Smooth Muscle Duodenum
39 chr22:20916400-20920000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr22:20916400-20920000 Strong transcription Adipose Nuclei Adipose
41 chr22:20916400-20920000 Strong transcription HSMMtube muscle
42 chr22:20916800-20919800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
43 chr22:20917000-20922800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr22:20917200-20921600 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr22:20917200-20923000 Genic enhancers NHEK skin
46 chr22:20917200-20923800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr22:20917400-20919800 Genic enhancers Primary T cells from cord blood blood
48 chr22:20917400-20920600 Strong transcription NH-A brain
49 chr22:20917400-20922600 Strong transcription Primary B cells from peripheral blood blood
50 chr22:20917400-20923800 Strong transcription Primary B cells from cord blood blood

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