The 2.0 version of rSNPBase

Variant report

Variant rs6725464
Chromosome Location chr2:10074809-10074810
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:9993800-10079600 Weak transcription Gastric stomach
2 chr2:10030400-10077200 Weak transcription Aorta Aorta
3 chr2:10030600-10080600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:10036600-10076200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr2:10037200-10080400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:10037800-10075600 Weak transcription Brain Cingulate Gyrus brain
7 chr2:10038600-10079800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr2:10038600-10081400 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:10042600-10077000 Weak transcription Colon Smooth Muscle Colon
10 chr2:10045800-10079600 Weak transcription Esophagus oesophagus
11 chr2:10046000-10075200 Weak transcription Brain Hippocampus Middle brain
12 chr2:10047200-10080000 Weak transcription Colonic Mucosa Colon
13 chr2:10049000-10077400 Weak transcription Brain Anterior Caudate brain
14 chr2:10049400-10077200 Weak transcription Brain Angular Gyrus brain
15 chr2:10049400-10081000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr2:10049600-10081200 Weak transcription H9 Cell Line embryonic stem cell
17 chr2:10052800-10076600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:10053200-10077800 Weak transcription Liver Liver
19 chr2:10054800-10079000 Weak transcription Fetal Kidney kidney
20 chr2:10055000-10080800 Weak transcription Pancreas Pancrea
21 chr2:10055000-10080800 Weak transcription Placenta Amnion Placenta Amnion
22 chr2:10055000-10081800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr2:10055200-10079600 Weak transcription K562 blood
24 chr2:10055200-10080800 Weak transcription HMEC breast
25 chr2:10055800-10075800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr2:10058800-10076000 Weak transcription Rectal Smooth Muscle rectum
27 chr2:10059000-10080600 Weak transcription HSMMtube muscle
28 chr2:10059400-10081200 Weak transcription GM12878-XiMat blood
29 chr2:10060400-10075800 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr2:10060600-10075200 Weak transcription Osteobl bone
31 chr2:10060600-10080200 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr2:10060800-10077400 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr2:10061000-10079600 Weak transcription HepG2 liver
34 chr2:10061000-10080800 Weak transcription Brain Germinal Matrix brain
35 chr2:10061000-10080800 Weak transcription NH-A brain
36 chr2:10061000-10080800 Weak transcription NHEK skin
37 chr2:10061400-10077800 Weak transcription Primary B cells from cord blood blood
38 chr2:10061600-10077800 Weak transcription Ovary ovary
39 chr2:10062600-10080200 Weak transcription Duodenum Mucosa Duodenum
40 chr2:10063000-10080800 Weak transcription NHLF lung
41 chr2:10064200-10079400 Weak transcription Fetal Muscle Leg muscle
42 chr2:10064200-10080200 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr2:10064600-10079200 Weak transcription Fetal Brain Female brain
44 chr2:10064800-10077000 Weak transcription Fetal Lung lung
45 chr2:10065000-10080800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr2:10069000-10077000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr2:10069600-10079800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:10070800-10076000 Strong transcription Fetal Thymus thymus
49 chr2:10070800-10080800 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr2:10071600-10075600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015