Variant report

Variant	rs6734447
Chromosome Location	chr2:183029857-183029858
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10209868	1.00[AMR][1000 genomes]
rs10930983	1.00[AMR][1000 genomes]
rs1196182	1.00[AMR][1000 genomes]
rs2701674	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875477	chr2:182938377-183086478	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:183013600-183048000	Weak transcription	Aorta	Aorta
2	chr2:183019400-183048200	Weak transcription	Left Ventricle	heart
3	chr2:183025600-183046000	Weak transcription	Fetal Stomach	stomach
4	chr2:183028000-183031200	Enhancers	Fetal Intestine Large	intestine
5	chr2:183028400-183032000	Enhancers	Fetal Intestine Small	intestine
6	chr2:183028800-183032200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr2:183029200-183030400	Enhancers	NHDF-Ad	bronchial
8	chr2:183029200-183031200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr2:183029400-183030400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr2:183029800-183030400	Enhancers	Osteobl	bone
11	chr2:183029800-183030800	Enhancers	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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