Variant report

Variant	rs6737584
Chromosome Location	chr2:125331305-125331306
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10445856	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10445857	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs13008208	0.86[ASN][1000 genomes]
rs13021695	0.86[ASN][1000 genomes]
rs13029736	0.86[ASN][1000 genomes]
rs1587787	0.86[ASN][1000 genomes]
rs17011743	0.86[ASN][1000 genomes]
rs34861575	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014610	chr2:125124983-125350342	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv834357	chr2:125258157-125421507	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:125321600-125345200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr2:125327200-125332000	Enhancers	HepG2	liver
3	chr2:125329000-125333000	Weak transcription	Liver	Liver
4	chr2:125329600-125331400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr2:125330000-125331800	Enhancers	Fetal Intestine Large	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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