The 2.0 version of rSNPBase

Variant report

Variant rs6740939
Chromosome Location chr2:20953124-20953125
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20887800-20965200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr2:20896600-20960200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr2:20899800-20972400 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr2:20902400-20971800 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr2:20911800-20960400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr2:20915400-20966800 Weak transcription Gastric stomach
7 chr2:20917600-20971800 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr2:20919200-20960000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr2:20922200-20960200 Weak transcription Fetal Stomach stomach
10 chr2:20925000-20960200 Weak transcription HSMMtube muscle
11 chr2:20925000-20960400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr2:20925800-20956800 Weak transcription Aorta Aorta
13 chr2:20926200-20966800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr2:20926200-20977000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:20926400-20995000 Weak transcription Hela-S3 cervix
16 chr2:20927000-20957400 Weak transcription Left Ventricle heart
17 chr2:20928400-20957400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr2:20928600-20960200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr2:20928600-20960200 Weak transcription Placenta Placenta
20 chr2:20928600-20960200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:20928800-20959800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:20934000-20968200 Weak transcription Colonic Mucosa Colon
23 chr2:20937000-20967600 Weak transcription Dnd41 blood
24 chr2:20937200-20974400 Weak transcription HSMM muscle
25 chr2:20937600-20960000 Weak transcription Primary T cells fromperipheralblood blood
26 chr2:20937600-20967600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr2:20937800-20958200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr2:20938800-20960000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr2:20946400-20956800 Weak transcription Liver Liver
30 chr2:20946600-20967000 Weak transcription Muscle Satellite Cultured Cells --
31 chr2:20946600-20972200 Weak transcription Esophagus oesophagus
32 chr2:20947200-20957000 Weak transcription Fetal Intestine Large intestine
33 chr2:20948000-20960200 Weak transcription NHEK skin
34 chr2:20949000-20966800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr2:20949200-20979200 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:20949600-20960600 Weak transcription K562 blood
37 chr2:20950200-20960400 Weak transcription Fetal Thymus thymus
38 chr2:20950600-20959400 Weak transcription Primary B cells from peripheral blood blood
39 chr2:20950600-20971600 Weak transcription Fetal Kidney kidney
40 chr2:20950800-20959600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:20950800-20966600 Weak transcription Fetal Muscle Trunk muscle
42 chr2:20951000-20972400 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr2:20951200-20963000 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr2:20951600-20973600 Weak transcription Brain Cingulate Gyrus brain
45 chr2:20951800-20993200 Weak transcription Colon Smooth Muscle Colon
46 chr2:20952200-20953600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr2:20952200-20965400 Weak transcription Thymus Thymus
48 chr2:20952400-20970600 Weak transcription Fetal Lung lung
49 chr2:20952600-20957000 Weak transcription Fetal Intestine Small intestine
50 chr2:20952600-20957200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015