Variant report

Variant	rs6751219
Chromosome Location	chr2:125726005-125726006
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs58462647	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834361	chr2:125601081-125810992	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv874991	chr2:125692490-125901811	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:125725400-125726400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr2:125725600-125726600	Weak transcription	Brain Cingulate Gyrus	brain
3	chr2:125725600-125726600	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr2:125725600-125726600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr2:125725800-125726200	Weak transcription	Brain Hippocampus Middle	brain
6	chr2:125725800-125726200	Weak transcription	Brain Substantia Nigra	brain
7	chr2:125725800-125727600	Weak transcription	Brain Anterior Caudate	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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