Variant report

Variant	rs6757307
Chromosome Location	chr2:67641095-67641096
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:67640053..67642807-chr2:67660180..67662976,2	MCF-7	breast:
2	chr2:67639893..67641689-chr2:67646484..67648117,2	K562	blood:
3	chr2:67639942..67641689-chr2:67646153..67648117,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs6709141	1.00[AMR][1000 genomes]
rs6729050	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6732197	1.00[AMR][1000 genomes]
rs6759393	1.00[AMR][1000 genomes]
rs7557523	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1008584	chr2:67168244-67703601	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	nsv535775	chr2:67168244-67703601	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
3	nsv534389	chr2:67388428-68225338	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
4	nsv834249	chr2:67515471-67691605	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
5	esv3335541	chr2:67577544-67773907	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67625400-67641200	Weak transcription	Fetal Muscle Leg	muscle
2	chr2:67625400-67641400	Weak transcription	HSMMtube	muscle
3	chr2:67625400-67643000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr2:67627600-67641200	Weak transcription	Primary T cells from cord blood	blood
5	chr2:67628000-67641800	Weak transcription	Aorta	Aorta
6	chr2:67628200-67641200	Weak transcription	Colon Smooth Muscle	Colon
7	chr2:67628200-67641400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr2:67628400-67642000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr2:67631600-67641200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr2:67638200-67641800	Weak transcription	NHDF-Ad	bronchial
11	chr2:67638600-67641800	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr2:67638600-67643200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr2:67638800-67650600	Weak transcription	Fetal Lung	lung
14	chr2:67638800-67651600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr2:67639000-67641200	Weak transcription	GM12878-XiMat	blood
16	chr2:67639000-67641800	Weak transcription	A549	lung
17	chr2:67639000-67643400	Weak transcription	Left Ventricle	heart
18	chr2:67639200-67641400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr2:67639200-67643400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr2:67639200-67673600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr2:67639400-67642000	Weak transcription	Osteobl	bone
22	chr2:67639600-67641400	Weak transcription	Adipose Nuclei	Adipose
23	chr2:67639600-67641600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr2:67639800-67641400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr2:67640000-67641200	Weak transcription	Primary B cells from cord blood	blood
26	chr2:67640000-67642800	Weak transcription	Pancreas	Pancrea
27	chr2:67640000-67643000	Weak transcription	HSMM	muscle

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