The 2.0 version of rSNPBase

Variant report

Variant rs6757474
Chromosome Location chr2:179340710-179340711
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179316800-179341800 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr2:179316800-179342400 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr2:179316800-179342600 Weak transcription Aorta Aorta
4 chr2:179316800-179342800 Weak transcription Brain Cingulate Gyrus brain
5 chr2:179317000-179342000 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr2:179317200-179342800 Weak transcription Brain Hippocampus Middle brain
7 chr2:179317400-179341200 Weak transcription Colon Smooth Muscle Colon
8 chr2:179317400-179341600 Weak transcription GM12878-XiMat blood
9 chr2:179318000-179342800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:179321200-179342400 Weak transcription HSMM muscle
11 chr2:179321200-179342400 Weak transcription HSMMtube muscle
12 chr2:179325600-179342000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr2:179326200-179342000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr2:179326200-179342400 Weak transcription Adipose Nuclei Adipose
15 chr2:179326200-179342600 Weak transcription Primary T cells from cord blood blood
16 chr2:179327000-179342400 Weak transcription Rectal Smooth Muscle rectum
17 chr2:179327200-179341800 Weak transcription NHLF lung
18 chr2:179327200-179342400 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr2:179327400-179341800 Weak transcription HUVEC blood vessel
20 chr2:179328200-179342600 Weak transcription Fetal Thymus thymus
21 chr2:179328200-179342600 Weak transcription Placenta Amnion Placenta Amnion
22 chr2:179330400-179341800 Weak transcription NH-A brain
23 chr2:179330400-179342000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr2:179330600-179342400 Weak transcription Duodenum Mucosa Duodenum
25 chr2:179330800-179342600 Weak transcription Colonic Mucosa Colon
26 chr2:179331200-179342800 Weak transcription Lung lung
27 chr2:179331600-179342400 Weak transcription Psoas Muscle Psoas
28 chr2:179331800-179342000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr2:179332200-179341800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr2:179332800-179342600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr2:179333000-179342400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr2:179333400-179341800 Weak transcription Fetal Intestine Small intestine
33 chr2:179334200-179342400 Weak transcription Primary B cells from cord blood blood
34 chr2:179334200-179342400 Weak transcription Fetal Muscle Trunk muscle
35 chr2:179334400-179341600 Weak transcription Primary hematopoietic stem cells blood
36 chr2:179334400-179342000 Weak transcription Fetal Intestine Large intestine
37 chr2:179334600-179341800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr2:179334600-179341800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr2:179335000-179342400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr2:179335200-179341600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr2:179335200-179341600 Weak transcription Fetal Lung lung
42 chr2:179339000-179341400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:179339000-179342600 Weak transcription Brain Angular Gyrus brain
44 chr2:179339000-179342600 Weak transcription Right Ventricle heart
45 chr2:179339200-179341400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr2:179339200-179342400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr2:179339400-179341400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr2:179339400-179341400 Weak transcription Fetal Muscle Leg muscle
49 chr2:179339400-179341800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr2:179339400-179341800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015