| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv999341 |
chr2:132714332-133358577 |
Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
52 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv916487 |
chr2:132719325-133355859 |
Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
51 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1009861 |
chr2:132719550-133358577 |
Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
51 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv2763165 |
chr2:132719550-133358589 |
Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
51 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv431701 |
chr2:132722012-133356398 |
Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
51 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv526029 |
chr2:132733281-133351415 |
Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
51 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv999965 |
chr2:132743229-133358577 |
Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
49 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1011421 |
chr2:132895241-133682185 |
Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
49 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv459418 |
chr2:133034154-133348083 |
Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
25 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv583149 |
chr2:133034154-133348083 |
Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
25 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv583150 |
chr2:133034154-133351703 |
Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
25 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv1004841 |
chr2:133124355-133350008 |
Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv583153 |
chr2:133167263-133361282 |
Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 14 |
nsv875137 |
chr2:133167263-133714142 |
Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 15 |
nsv834378 |
chr2:133169796-133349406 |
Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 16 |
nsv459429 |
chr2:133208597-133253386 |
ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 17 |
nsv583154 |
chr2:133208597-133253386 |
Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 18 |
esv3458346 |
chr2:133246276-133248532 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 19 |
esv16350 |
chr2:133246308-133248461 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 20 |
esv3458345 |
chr2:133246332-133248486 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 21 |
esv3458347 |
chr2:133246351-133248453 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 22 |
esv3458348 |
chr2:133246417-133248419 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
rSNPs within LD-proxies of this variant (count:24)
