Variant report

Variant	rs6757756
Chromosome Location	chr2:167466127-167466128
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7564582	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532474	chr2:166993501-167548531	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv529384	chr2:167143465-167958752	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2752480	chr2:167163493-167567493	Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167464800-167467200	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr2:167464800-167467600	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr2:167465000-167466400	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr2:167465200-167467400	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr2:167465400-167466200	Enhancers	HepG2	liver
6	chr2:167465400-167466800	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr2:167465400-167467400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr2:167465600-167469800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr2:167465600-167470400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr2:167465800-167470600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr2:167466000-167466200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr2:167466000-167466400	Enhancers	H1 Cell Line	embryonic stem cell
13	chr2:167466000-167466400	Active TSS	Fetal Kidney	kidney
14	chr2:167466000-167466400	Enhancers	Thymus	Thymus
15	chr2:167466000-167466600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
16	chr2:167466000-167467000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr2:167466000-167467400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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