Variant report

Variant	rs67675900
Chromosome Location	chr10:118765761-118765762
allele	-/A/AA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr10:118763653-118765765	A549	lung:	n/a	chr10:118765306-118765322 chr10:118765332-118765339
2	NFIC	chr10:118763787-118765767	ECC-1	luminal epithelium:	n/a	n/a
3	TEAD4	chr10:118763684-118765767	ECC-1	luminal epithelium:	n/a	n/a
4	TCF12	chr10:118763864-118765812	ECC-1	luminal epithelium:	n/a	chr10:118764507-118764514
5	MAX	chr10:118763615-118765878	HCT-116	colon:	n/a	chr10:118765306-118765322 chr10:118765332-118765339
6	TCF12	chr10:118763913-118765797	A549	lung:	n/a	chr10:118764507-118764514
7	MAX	chr10:118763839-118765778	ECC-1	luminal epithelium:	n/a	chr10:118765306-118765322 chr10:118765332-118765339

No.	Distal block	Cell Line	Cell type
1	chr10:118763331..118765453-chr10:118765627..118768169,2	MCF-7	breast:
2	chr10:118765114..118768175-chr10:118770999..118774519,3	K562	blood:
3	chr10:118718724..118721628-chr10:118764683..118766816,3	MCF-7	breast:

Variant related genes	Relation type
KIAA1598	TF binding region
ENSG00000187164	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755506	chr10:118748764-118800107	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	diseases
2	esv3525989	chr10:118764562-118770560	Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	n/a
3	esv3525990	chr10:118765187-118770410	Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	n/a
4	esv3525991	chr10:118765187-118770410	Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118763400-118766200	Active TSS	A549	lung
2	chr10:118763600-118766200	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr10:118765200-118765800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
4	chr10:118765200-118765800	Flanking Active TSS	HepG2	liver
5	chr10:118765400-118766200	Weak transcription	NHDF-Ad	bronchial
6	chr10:118765400-118766800	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr10:118765600-118765800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
8	chr10:118765600-118765800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr10:118765600-118765800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr10:118765600-118765800	Active TSS	Fetal Intestine Large	intestine
11	chr10:118765600-118766000	Weak transcription	HMEC	breast
12	chr10:118765600-118766000	Weak transcription	NHEK	skin
13	chr10:118765600-118766200	Enhancers	Brain Hippocampus Middle	brain
14	chr10:118765600-118766200	Enhancers	Fetal Brain Male	brain
15	chr10:118765600-118766200	Active TSS	Hela-S3	cervix
16	chr10:118765600-118766200	Active TSS	K562	blood
17	chr10:118765600-118766400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr10:118765600-118766400	Enhancers	HUES6 Cell Line	embryonic stem cell
19	chr10:118765600-118766400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr10:118765600-118766400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr10:118765600-118766400	Enhancers	Liver	Liver
22	chr10:118765600-118766400	Enhancers	Brain Cingulate Gyrus	brain
23	chr10:118765600-118766400	Active TSS	Brain Germinal Matrix	brain
24	chr10:118765600-118766400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
25	chr10:118765600-118766400	Enhancers	NH-A	brain
26	chr10:118765600-118766600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr10:118765600-118766600	Weak transcription	Stomach Mucosa	stomach
28	chr10:118765600-118766800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr10:118765600-118766800	Enhancers	HUVEC	blood vessel
30	chr10:118765600-118767000	Enhancers	Brain Substantia Nigra	brain
31	chr10:118765600-118767200	Enhancers	Monocytes-CD14+_RO01746	blood

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