Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10428091	0.84[ASN][1000 genomes]
rs10428122	0.81[ASN][1000 genomes]
rs11127733	0.83[ASN][1000 genomes]
rs13067333	0.86[ASN][1000 genomes]
rs1459913	0.81[ASN][1000 genomes]
rs1459918	0.82[ASN][1000 genomes]
rs1459919	0.82[ASN][1000 genomes]
rs1585384	0.81[ASN][1000 genomes]
rs1599209	0.80[ASN][1000 genomes]
rs2125812	0.83[ASN][1000 genomes]
rs2125813	0.83[ASN][1000 genomes]
rs2169110	0.83[ASN][1000 genomes]
rs2169113	0.82[ASN][1000 genomes]
rs2362440	0.80[ASN][1000 genomes]
rs2362449	0.84[ASN][1000 genomes]
rs34134719	0.83[ASN][1000 genomes]
rs34520011	0.86[ASN][1000 genomes]
rs35194427	0.83[ASN][1000 genomes]
rs4350935	0.85[ASN][1000 genomes]
rs4856889	0.80[ASN][1000 genomes]
rs4856890	0.84[ASN][1000 genomes]
rs4856893	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6768970	0.84[ASN][1000 genomes]
rs6798796	0.84[ASN][1000 genomes]
rs68005467	0.81[ASN][1000 genomes]
rs7618120	0.83[ASN][1000 genomes]
rs7642815	0.81[ASN][1000 genomes]
rs9824545	0.84[ASN][1000 genomes]
rs9833922	0.84[ASN][1000 genomes]
rs9855740	0.83[ASN][1000 genomes]
rs9857889	0.81[ASN][1000 genomes]
rs9871777	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3359258	chr3:67589615-67828274	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv1002010	chr3:67785913-68312064	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:67819000-67821800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr3:67819200-67821800	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr3:67819200-67822400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr3:67819600-67821800	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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