Variant report
| Variant | rs6799579 |
|---|---|
| Chromosome Location | chr3:50057500-50057501 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:49998000-50078200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 2 | chr3:49998400-50078600 | Weak transcription | K562 | blood |
| 3 | chr3:50006000-50064000 | Weak transcription | Stomach Mucosa | stomach |
| 4 | chr3:50010800-50087000 | Weak transcription | NHLF | lung |
| 5 | chr3:50011000-50078400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 6 | chr3:50011000-50091600 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr3:50015200-50092000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 8 | chr3:50028800-50082600 | Weak transcription | Right Ventricle | heart |
| 9 | chr3:50030200-50065600 | Weak transcription | Fetal Heart | heart |
| 10 | chr3:50035200-50058200 | Weak transcription | Esophagus | oesophagus |
| 11 | chr3:50036600-50085600 | Weak transcription | HUVEC | blood vessel |
| 12 | chr3:50037200-50087000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 13 | chr3:50037600-50061800 | Weak transcription | Small Intestine | intestine |
| 14 | chr3:50038400-50084600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 15 | chr3:50038600-50087400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 16 | chr3:50039400-50061800 | Weak transcription | Colon Smooth Muscle | Colon |
| 17 | chr3:50039400-50084600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 18 | chr3:50041400-50095200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr3:50041600-50058200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 20 | chr3:50041600-50061600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 21 | chr3:50041600-50063000 | Weak transcription | Brain Substantia Nigra | brain |
| 22 | chr3:50041600-50065200 | Weak transcription | NH-A | brain |
| 23 | chr3:50041600-50085000 | Weak transcription | Fetal Brain Female | brain |
| 24 | chr3:50041600-50085400 | Weak transcription | Brain Angular Gyrus | brain |
| 25 | chr3:50041600-50093400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 26 | chr3:50041800-50085200 | Weak transcription | Fetal Brain Male | brain |
| 27 | chr3:50043400-50085200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 28 | chr3:50045200-50085000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 29 | chr3:50046200-50059000 | Strong transcription | Dnd41 | blood |
| 30 | chr3:50046800-50064600 | Weak transcription | Aorta | Aorta |
| 31 | chr3:50046800-50065400 | Weak transcription | Fetal Kidney | kidney |
| 32 | chr3:50046800-50085800 | Weak transcription | HMEC | breast |
| 33 | chr3:50047000-50061400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 34 | chr3:50047200-50085200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 35 | chr3:50047200-50085400 | Weak transcription | Left Ventricle | heart |
| 36 | chr3:50047200-50092600 | Weak transcription | Gastric | stomach |
| 37 | chr3:50047400-50085000 | Weak transcription | Lung | lung |
| 38 | chr3:50048800-50057800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 39 | chr3:50048800-50060200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr3:50048800-50085600 | Weak transcription | A549 | lung |
| 41 | chr3:50049800-50084000 | Weak transcription | Brain Germinal Matrix | brain |
| 42 | chr3:50050200-50057600 | Strong transcription | Fetal Intestine Large | intestine |
| 43 | chr3:50050600-50058200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 44 | chr3:50050600-50066000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 45 | chr3:50051000-50062800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 46 | chr3:50051200-50057800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 47 | chr3:50051200-50060000 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 48 | chr3:50051400-50084600 | Weak transcription | Spleen | Spleen |
| 49 | chr3:50051600-50095200 | Weak transcription | Pancreas | Pancrea |
| 50 | chr3:50051800-50085000 | Weak transcription | Brain Anterior Caudate | brain |
