Variant report

Variant	rs68028103
Chromosome Location	chr5:57866112-57866113
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10042933	0.81[AMR][1000 genomes]
rs11948948	0.86[AMR][1000 genomes]
rs1609728	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1848514	0.86[AMR][1000 genomes]
rs1876691	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4700300	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs55665530	0.81[AMR][1000 genomes]
rs55696051	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs57401667	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6450482	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6450483	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758200	0.86[AMR][1000 genomes]
rs72760204	0.86[AMR][1000 genomes]
rs72760224	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7708101	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7728642	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57862200-57866400	Weak transcription	Fetal Intestine Large	intestine
2	chr5:57862800-57866200	Weak transcription	Fetal Intestine Small	intestine
3	chr5:57862800-57867800	Weak transcription	Stomach Mucosa	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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