The 2.0 version of rSNPBase

Variant report

Variant rs6808394
Chromosome Location chr3:113122524-113122525
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113074400-113184400 Weak transcription Hela-S3 cervix
2 chr3:113080000-113123800 Weak transcription Primary B cells from peripheral blood blood
3 chr3:113080800-113143800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr3:113092400-113134200 Weak transcription Fetal Kidney kidney
5 chr3:113093600-113134800 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr3:113098800-113134800 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr3:113099000-113134800 Weak transcription A549 lung
8 chr3:113099600-113144800 Weak transcription Rectal Smooth Muscle rectum
9 chr3:113102200-113148800 Weak transcription Brain Angular Gyrus brain
10 chr3:113102400-113144400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr3:113102800-113122600 Weak transcription Spleen Spleen
12 chr3:113103200-113126200 Weak transcription Right Ventricle heart
13 chr3:113104000-113127400 Weak transcription Duodenum Mucosa Duodenum
14 chr3:113105600-113124200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr3:113106800-113143600 Weak transcription Dnd41 blood
16 chr3:113107000-113127400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr3:113107000-113137000 Weak transcription Esophagus oesophagus
18 chr3:113107200-113124200 Weak transcription Fetal Stomach stomach
19 chr3:113107200-113124200 Weak transcription GM12878-XiMat blood
20 chr3:113107200-113124600 Weak transcription Fetal Intestine Small intestine
21 chr3:113107200-113145200 Weak transcription Aorta Aorta
22 chr3:113107600-113138200 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr3:113108600-113125000 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr3:113109200-113159800 Weak transcription Brain Hippocampus Middle brain
25 chr3:113110200-113124400 Weak transcription Fetal Muscle Trunk muscle
26 chr3:113111600-113146400 Weak transcription Brain Substantia Nigra brain
27 chr3:113112200-113148400 Weak transcription Brain Anterior Caudate brain
28 chr3:113112400-113123200 Strong transcription Primary T cells from cord blood blood
29 chr3:113112800-113123800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr3:113113000-113145600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr3:113113200-113122600 Weak transcription Primary monocytes fromperipheralblood blood
32 chr3:113114000-113143800 Weak transcription Fetal Thymus thymus
33 chr3:113114200-113123800 Weak transcription Small Intestine intestine
34 chr3:113116000-113122800 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr3:113116000-113125200 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr3:113117000-113123000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr3:113117400-113128000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr3:113117600-113148400 Weak transcription Placenta Placenta
39 chr3:113117800-113123000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr3:113118000-113134800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr3:113118200-113124400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr3:113118200-113124400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr3:113118200-113124400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr3:113119200-113124000 Weak transcription Adipose Nuclei Adipose
45 chr3:113119400-113129600 Weak transcription Psoas Muscle Psoas
46 chr3:113119600-113145200 Weak transcription Lung lung
47 chr3:113120000-113124400 Weak transcription Muscle Satellite Cultured Cells --
48 chr3:113120800-113122800 Strong transcription Skeletal Muscle Female skeletal muscle
49 chr3:113121000-113122800 Strong transcription Primary B cells from cord blood blood
50 chr3:113121000-113122800 Strong transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015