Variant report

Variant	rs6819129
Chromosome Location	chr4:174065687-174065688
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:1)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:174063680..174066835-chr4:174072765..174075948,3	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HMGB2-3	chr4:174065387-174066662	ENSG00000245213
2	lnc-GALNT7-2	chr4:174064731-174067014	FPKM1_group_24461_transcript_4
3	lnc-GALNT7-2	chr4:174064987-174065955	FPKM1_group_24461_transcript_4
4	lnc-GALNT7-2	chr4:174064731-174067014	NONHSAT099218

No data

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174042600-174069000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:174047000-174079000	Weak transcription	Fetal Thymus	thymus
3	chr4:174055000-174086000	Weak transcription	Thymus	Thymus
4	chr4:174060000-174066000	Weak transcription	Fetal Muscle Leg	muscle
5	chr4:174065200-174087200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr4:174065400-174083600	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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