Variant report

Variant rs6824410
Chromosome Location chr4:7906178-7906179
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:7894200-7912400 Weak transcription Fetal Intestine Large intestine
2 chr4:7894400-7906200 Weak transcription Placenta Amnion Placenta Amnion
3 chr4:7895600-7907600 Weak transcription Colonic Mucosa Colon
4 chr4:7896800-7907600 Weak transcription Fetal Intestine Small intestine
5 chr4:7897000-7907400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr4:7899600-7907000 Enhancers Fetal Brain Male brain
7 chr4:7899800-7930600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr4:7900000-7906400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr4:7900000-7907400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr4:7900200-7912400 Weak transcription NHEK skin
11 chr4:7900800-7914400 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr4:7901000-7907400 Enhancers HSMMtube muscle
13 chr4:7901000-7909000 Enhancers Fetal Brain Female brain
14 chr4:7901400-7909400 Enhancers Fetal Lung lung
15 chr4:7901600-7907400 Enhancers Duodenum Smooth Muscle Duodenum
16 chr4:7901600-7914400 Enhancers Fetal Muscle Leg muscle
17 chr4:7902000-7909200 Enhancers Fetal Heart heart
18 chr4:7902000-7909400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr4:7902200-7906200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr4:7902400-7907600 Enhancers Rectal Smooth Muscle rectum
21 chr4:7902600-7906400 Genic enhancers HSMM muscle
22 chr4:7903000-7906600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr4:7903200-7906600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:7903200-7907400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr4:7903400-7911400 Weak transcription Pancreas Pancrea
26 chr4:7903400-7911600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr4:7903600-7915000 Enhancers Fetal Stomach stomach
28 chr4:7904000-7906800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr4:7904200-7909400 Enhancers Right Atrium heart
30 chr4:7904400-7907400 Enhancers Fetal Muscle Trunk muscle
31 chr4:7904400-7909400 Enhancers NHLF lung
32 chr4:7904600-7906400 Weak transcription Esophagus oesophagus
33 chr4:7904600-7906600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr4:7904600-7907400 Weak transcription H1 Cell Line embryonic stem cell
35 chr4:7904600-7910000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr4:7904600-7910400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr4:7904600-7910400 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr4:7904800-7906400 Weak transcription Placenta Placenta
39 chr4:7904800-7906600 Enhancers Brain Cingulate Gyrus brain
40 chr4:7904800-7906800 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr4:7904800-7907400 Weak transcription Right Ventricle heart
42 chr4:7904800-7910000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr4:7904800-7910400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr4:7904800-7911200 Weak transcription Gastric stomach
45 chr4:7904800-7912200 Weak transcription Duodenum Mucosa Duodenum
46 chr4:7905000-7906200 Flanking Active TSS Brain Germinal Matrix brain
47 chr4:7905000-7906200 Weak transcription Brain Hippocampus Middle brain
48 chr4:7905000-7906800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr4:7905000-7906800 Enhancers HMEC breast
50 chr4:7905000-7911200 Weak transcription Primary T helper naive cells fromperipheralblood blood

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