The 2.0 version of rSNPBase

Variant report

Variant rs6830504
Chromosome Location chr4:100644543-100644544
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:100636600-100646600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr4:100641200-100645400 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr4:100641200-100646000 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr4:100642200-100646000 Enhancers Skeletal Muscle Female skeletal muscle
5 chr4:100642200-100646400 Enhancers Fetal Lung lung
6 chr4:100642400-100644800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr4:100642600-100645600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
8 chr4:100642800-100644800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr4:100642800-100644800 Enhancers Hela-S3 cervix
10 chr4:100642800-100645600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr4:100642800-100647200 Enhancers Cortex derived primary cultured neurospheres brain
12 chr4:100643000-100644800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr4:100643000-100645200 Enhancers HUES64 Cell Line embryonic stem cell
14 chr4:100643000-100645600 Enhancers NHEK skin
15 chr4:100643000-100645800 Enhancers HMEC breast
16 chr4:100643000-100646000 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr4:100643000-100646000 Enhancers Skeletal Muscle Male skeletal muscle
18 chr4:100643200-100644800 Enhancers Primary hematopoietic stem cells short term culture blood
19 chr4:100643200-100645200 Enhancers Ovary ovary
20 chr4:100643200-100645200 Enhancers Right Atrium heart
21 chr4:100643200-100645400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr4:100643200-100645600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr4:100643400-100645000 Enhancers HUES48 Cell Line embryonic stem cell
24 chr4:100643400-100645000 Enhancers A549 lung
25 chr4:100643400-100645200 Enhancers Pancreas Pancrea
26 chr4:100643400-100645400 Enhancers Fetal Heart heart
27 chr4:100643400-100645600 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr4:100643400-100645600 Enhancers Fetal Intestine Large intestine
29 chr4:100643400-100645600 Enhancers Fetal Intestine Small intestine
30 chr4:100643600-100645800 Enhancers Adipose Nuclei Adipose
31 chr4:100643800-100644800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr4:100643800-100645000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr4:100643800-100645000 Enhancers K562 blood
34 chr4:100643800-100645200 Enhancers HepG2 liver
35 chr4:100643800-100645600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr4:100644000-100645000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
37 chr4:100644000-100645200 Enhancers Left Ventricle heart
38 chr4:100644000-100645400 Enhancers HUES6 Cell Line embryonic stem cell
39 chr4:100644000-100645400 Enhancers Liver Liver
40 chr4:100644000-100645400 Enhancers Duodenum Mucosa Duodenum
41 chr4:100644000-100645800 Enhancers HSMMtube muscle
42 chr4:100644000-100646000 Enhancers Colon Smooth Muscle Colon
43 chr4:100644000-100646000 Enhancers Fetal Muscle Leg muscle
44 chr4:100644000-100646000 Enhancers Rectal Smooth Muscle rectum
45 chr4:100644200-100645000 Enhancers Fetal Muscle Trunk muscle
46 chr4:100644200-100645000 Enhancers Lung lung
47 chr4:100644200-100645400 Enhancers Stomach Smooth Muscle stomach
48 chr4:100644200-100645400 Enhancers HSMM muscle
49 chr4:100644200-100645400 Enhancers NH-A brain
50 chr4:100644200-100645600 Enhancers Stomach Mucosa stomach

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Last update: Aug 31, 2015