Variant report

Variant rs6831088
Chromosome Location chr4:20257769-20257770
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:20252200-20258200 Active TSS NHDF-Ad bronchial
2 chr4:20252600-20257800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr4:20252800-20258600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr4:20253000-20258000 Active TSS Placenta Amnion Placenta Amnion
5 chr4:20253000-20259000 Active TSS Aorta Aorta
6 chr4:20253800-20258400 Flanking Active TSS HUVEC blood vessel
7 chr4:20254200-20259400 Transcr. at gene 5' and 3' Fetal Lung lung
8 chr4:20254800-20258000 Active TSS Right Atrium heart
9 chr4:20255400-20257800 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
10 chr4:20255800-20258000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr4:20256400-20258000 Flanking Active TSS Muscle Satellite Cultured Cells --
12 chr4:20256400-20259800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr4:20256600-20257800 Active TSS Placenta Placenta
14 chr4:20256600-20258400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
15 chr4:20256600-20258600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
16 chr4:20256800-20258800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr4:20257000-20257800 Active TSS Brain Anterior Caudate brain
18 chr4:20257000-20257800 Active TSS Rectal Smooth Muscle rectum
19 chr4:20257000-20258200 Bivalent/Poised TSS Stomach Smooth Muscle stomach
20 chr4:20257000-20258400 Active TSS NHLF lung
21 chr4:20257200-20257800 Bivalent Enhancer H1 Cell Line embryonic stem cell
22 chr4:20257200-20257800 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
23 chr4:20257200-20257800 Bivalent/Poised TSS Fetal Brain Male brain
24 chr4:20257200-20257800 Bivalent/Poised TSS Fetal Intestine Small intestine
25 chr4:20257200-20258000 Active TSS Adipose Nuclei Adipose
26 chr4:20257200-20258200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
27 chr4:20257200-20258200 Active TSS Fetal Stomach stomach
28 chr4:20257200-20258400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr4:20257200-20259200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
30 chr4:20257400-20257800 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
31 chr4:20257400-20257800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr4:20257400-20258000 Flanking Active TSS NHEK skin
33 chr4:20257400-20258200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:20257400-20258200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr4:20257400-20258400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr4:20257400-20258600 Flanking Active TSS Osteobl bone
37 chr4:20257400-20259200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
38 chr4:20257600-20257800 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
39 chr4:20257600-20257800 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
40 chr4:20257600-20257800 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
41 chr4:20257600-20257800 Flanking Active TSS Brain Hippocampus Middle brain
42 chr4:20257600-20257800 Flanking Active TSS Colon Smooth Muscle Colon
43 chr4:20257600-20257800 Bivalent Enhancer Fetal Brain Female brain
44 chr4:20257600-20257800 Enhancers Fetal Kidney kidney
45 chr4:20257600-20257800 Enhancers Hela-S3 cervix
46 chr4:20257600-20258000 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
47 chr4:20257600-20258000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr4:20257600-20258000 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr4:20257600-20258000 Enhancers NH-A brain
50 chr4:20257600-20259600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell

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