The 2.0 version of rSNPBase

Variant report

Variant rs6833592
Chromosome Location chr4:54005571-54005572
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53978800-54008000 Weak transcription Primary T cells from cord blood blood
2 chr4:53986800-54010800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr4:53986800-54011000 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr4:53987800-54016800 Weak transcription NHLF lung
5 chr4:53988200-54008000 Weak transcription Primary B cells from cord blood blood
6 chr4:53988600-54011000 Weak transcription Brain Cingulate Gyrus brain
7 chr4:53989200-54010200 Weak transcription Primary B cells from peripheral blood blood
8 chr4:53992400-54009600 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr4:53993800-54027800 Weak transcription Fetal Stomach stomach
10 chr4:53994000-54011000 Weak transcription Fetal Muscle Trunk muscle
11 chr4:53995200-54014800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr4:53995400-54017800 Weak transcription Brain Substantia Nigra brain
13 chr4:53997000-54017600 Weak transcription Gastric stomach
14 chr4:53997400-54020000 Weak transcription HSMM muscle
15 chr4:53997800-54011000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr4:53998000-54008600 Weak transcription Ovary ovary
17 chr4:53998000-54010800 Weak transcription Fetal Muscle Leg muscle
18 chr4:53998000-54011000 Weak transcription Left Ventricle heart
19 chr4:53998400-54010200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr4:53998600-54014400 Weak transcription Brain Hippocampus Middle brain
21 chr4:53998800-54010400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr4:53999000-54010200 Weak transcription Osteobl bone
23 chr4:53999000-54011000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr4:53999000-54013200 Weak transcription Brain Angular Gyrus brain
25 chr4:53999000-54017200 Weak transcription Fetal Lung lung
26 chr4:53999000-54027800 Weak transcription NHDF-Ad bronchial
27 chr4:53999200-54009600 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr4:53999200-54011000 Weak transcription Adipose Nuclei Adipose
29 chr4:54001200-54009800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr4:54001200-54017600 Weak transcription Spleen Spleen
31 chr4:54002600-54009800 Weak transcription Primary T cells fromperipheralblood blood
32 chr4:54002800-54007400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr4:54003400-54019000 Weak transcription GM12878-XiMat blood
34 chr4:54003600-54012800 Weak transcription Esophagus oesophagus
35 chr4:54004000-54017600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr4:54004200-54006800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr4:54004200-54011000 Weak transcription Pancreas Pancrea
38 chr4:54004200-54020800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr4:54004200-54052200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr4:54005400-54010800 Weak transcription Dnd41 blood
41 chr4:54005400-54012400 Weak transcription HMEC breast

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Last update: Aug 31, 2015