The 2.0 version of rSNPBase

Variant report

Variant rs6833666
Chromosome Location chr4:54316132-54316133
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54244600-54319200 Weak transcription Pancreas Pancrea
2 chr4:54246200-54319200 Weak transcription Aorta Aorta
3 chr4:54253400-54327200 Weak transcription Colonic Mucosa Colon
4 chr4:54256600-54319200 Weak transcription Gastric stomach
5 chr4:54268000-54327600 Weak transcription Colon Smooth Muscle Colon
6 chr4:54268400-54319800 Weak transcription A549 lung
7 chr4:54270000-54330800 Weak transcription Brain Substantia Nigra brain
8 chr4:54270200-54316600 Weak transcription Esophagus oesophagus
9 chr4:54276400-54319000 Weak transcription H9 Cell Line embryonic stem cell
10 chr4:54276600-54319000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr4:54276600-54319000 Weak transcription Lung lung
12 chr4:54276800-54316800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr4:54276800-54324800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr4:54286200-54316600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr4:54291800-54329400 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr4:54292200-54331200 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr4:54294000-54325600 Weak transcription Fetal Heart heart
18 chr4:54294400-54320600 Weak transcription HSMMtube muscle
19 chr4:54295200-54331600 Weak transcription Hela-S3 cervix
20 chr4:54295400-54316600 Weak transcription Ovary ovary
21 chr4:54295600-54316600 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr4:54295600-54319800 Weak transcription Brain Anterior Caudate brain
23 chr4:54295600-54339400 Weak transcription Fetal Brain Male brain
24 chr4:54296800-54320400 Weak transcription Brain Germinal Matrix brain
25 chr4:54297400-54319200 Weak transcription Brain Cingulate Gyrus brain
26 chr4:54297400-54319200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr4:54297400-54319200 Weak transcription NH-A brain
28 chr4:54297600-54326200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr4:54297600-54329600 Strong transcription Dnd41 blood
30 chr4:54298600-54329600 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr4:54302800-54320600 Weak transcription Psoas Muscle Psoas
32 chr4:54305000-54324600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr4:54311000-54319800 Weak transcription Brain Angular Gyrus brain
34 chr4:54311000-54320800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr4:54311200-54317800 Weak transcription Fetal Stomach stomach
36 chr4:54311200-54319200 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr4:54311400-54319000 Weak transcription H1 Cell Line embryonic stem cell
38 chr4:54311400-54319000 Weak transcription Fetal Kidney kidney
39 chr4:54311400-54320800 Weak transcription Right Ventricle heart
40 chr4:54311600-54316600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr4:54311600-54318200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr4:54311600-54319200 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr4:54311600-54319800 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr4:54311800-54318600 Weak transcription GM12878-XiMat blood
45 chr4:54311800-54318800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr4:54312000-54316600 Weak transcription Fetal Intestine Small intestine
47 chr4:54312000-54318000 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr4:54312000-54318200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr4:54312000-54318600 Weak transcription Fetal Thymus thymus
50 chr4:54312000-54319000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015