Variant report

Variant rs6838080
Chromosome Location chr4:187002565-187002566
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:186990600-187006200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr4:186990600-187006200 Weak transcription Small Intestine intestine
3 chr4:186991000-187004200 Weak transcription Aorta Aorta
4 chr4:186991000-187006200 Weak transcription Colonic Mucosa Colon
5 chr4:186991200-187002600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr4:186991200-187003800 Weak transcription Primary hematopoietic stem cells blood
7 chr4:186991200-187005600 Weak transcription Right Ventricle heart
8 chr4:186991200-187007600 Weak transcription Rectal Smooth Muscle rectum
9 chr4:186991200-187009200 Weak transcription Lung lung
10 chr4:186991200-187009400 Weak transcription Brain Anterior Caudate brain
11 chr4:186991200-187009600 Weak transcription Fetal Kidney kidney
12 chr4:186991400-187002600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr4:186991400-187003600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr4:186995600-187006400 Weak transcription Colon Smooth Muscle Colon
15 chr4:186995800-187009200 Weak transcription Pancreas Pancrea
16 chr4:187000000-187002800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr4:187000200-187003200 Enhancers H1 Cell Line embryonic stem cell
18 chr4:187000200-187003200 Strong transcription Duodenum Mucosa Duodenum
19 chr4:187000400-187003200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr4:187000600-187005800 Weak transcription Left Ventricle heart
21 chr4:187000800-187006200 Weak transcription Spleen Spleen
22 chr4:187000800-187006600 Weak transcription Fetal Stomach stomach
23 chr4:187001000-187002800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr4:187001000-187008000 Weak transcription Ovary ovary
25 chr4:187001000-187018200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr4:187001200-187002600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr4:187001200-187002600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr4:187001200-187002600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr4:187001200-187003400 Weak transcription Fetal Intestine Small intestine
30 chr4:187001200-187003400 Weak transcription Fetal Lung lung
31 chr4:187001200-187003800 Weak transcription Adipose Nuclei Adipose
32 chr4:187001200-187004000 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr4:187001200-187006000 Weak transcription Esophagus oesophagus
34 chr4:187001200-187017200 Weak transcription Stomach Smooth Muscle stomach
35 chr4:187001400-187002600 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr4:187001400-187004600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr4:187001600-187009000 Weak transcription Brain Substantia Nigra brain
38 chr4:187002000-187002800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr4:187002000-187003000 Enhancers Fetal Heart heart
40 chr4:187002200-187002600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
41 chr4:187002200-187002600 Enhancers iPS-18 Cell Line embryonic stem cell
42 chr4:187002200-187002800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr4:187002200-187002800 Enhancers Cortex derived primary cultured neurospheres brain
44 chr4:187002200-187002800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
45 chr4:187002200-187003000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
46 chr4:187002200-187003200 Active TSS ES-I3 Cell Line embryonic stem cell
47 chr4:187002400-187002600 Flanking Active TSS H9 Cell Line embryonic stem cell
48 chr4:187002400-187002600 Active TSS HUES64 Cell Line embryonic stem cell
49 chr4:187002400-187002600 Enhancers iPS-15b Cell Line embryonic stem cell
50 chr4:187002400-187002600 Flanking Active TSS Fetal Muscle Leg muscle

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