Variant report

Variant	rs6860851
Chromosome Location	chr5:36725716-36725717
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10080178	1.00[MEX][hapmap]
rs10473036	1.00[MEX][hapmap]
rs2301064	1.00[MEX][hapmap]
rs3753180	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492319	chr5:36570707-37061019	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv830263	chr5:36576504-36755093	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36722000-36725800	Enhancers	Fetal Muscle Leg	muscle
2	chr5:36724000-36725800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
3	chr5:36724400-36726200	Weak transcription	Spleen	Spleen
4	chr5:36724800-36725800	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr5:36725000-36725800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr5:36725000-36726000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr5:36725200-36726000	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr5:36725400-36725800	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr5:36725400-36725800	Enhancers	Primary B cells from cord blood	blood
10	chr5:36725400-36725800	Enhancers	Primary hematopoietic stem cells	blood
11	chr5:36725400-36725800	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr5:36725400-36725800	Enhancers	Primary T helper naive cells from peripheral blood	blood
13	chr5:36725400-36725800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
14	chr5:36725400-36725800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr5:36725400-36726000	Enhancers	Primary B cells from peripheral blood	blood
16	chr5:36725400-36727600	Weak transcription	Hela-S3	cervix
17	chr5:36725600-36725800	Enhancers	Primary neutrophils fromperipheralblood	blood
18	chr5:36725600-36726000	Enhancers	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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