The 2.0 version of rSNPBase

Variant report

Variant rs6861850
Chromosome Location chr5:79982350-79982351
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79951600-80015600 Weak transcription Small Intestine intestine
2 chr5:79951800-79982800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr5:79952400-79983000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr5:79952600-79985200 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr5:79952600-79991600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr5:79956400-80015600 Weak transcription Psoas Muscle Psoas
7 chr5:79958200-79998000 Weak transcription Fetal Brain Male brain
8 chr5:79962800-80015600 Weak transcription A549 lung
9 chr5:79963600-80038600 Weak transcription Right Ventricle heart
10 chr5:79964000-79984600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr5:79964000-79984800 Weak transcription H9 Cell Line embryonic stem cell
12 chr5:79964000-79998000 Weak transcription Aorta Aorta
13 chr5:79964400-79983200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr5:79964400-79999200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr5:79964600-79983000 Weak transcription Brain Angular Gyrus brain
16 chr5:79964800-79998000 Weak transcription Gastric stomach
17 chr5:79964800-80057800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr5:79965000-80021400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr5:79969400-80001200 Weak transcription NHLF lung
20 chr5:79969600-80010600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr5:79969800-79997000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr5:79970400-79997000 Weak transcription K562 blood
23 chr5:79971600-79989800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr5:79971600-79999400 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr5:79971600-80022200 Weak transcription HMEC breast
26 chr5:79971800-79999200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr5:79971800-80003400 Weak transcription NHDF-Ad bronchial
28 chr5:79971800-80015400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr5:79971800-80112400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr5:79972400-79999800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr5:79972400-80010400 Weak transcription NHEK skin
32 chr5:79972400-80037000 Weak transcription Brain Cingulate Gyrus brain
33 chr5:79972800-80001600 Weak transcription HUVEC blood vessel
34 chr5:79973200-80021600 Weak transcription NH-A brain
35 chr5:79973400-80008800 Weak transcription Brain Anterior Caudate brain
36 chr5:79974000-80003000 Weak transcription Fetal Heart heart
37 chr5:79974000-80021200 Weak transcription Muscle Satellite Cultured Cells --
38 chr5:79975000-79998000 Weak transcription Brain Inferior Temporal Lobe brain
39 chr5:79975200-80022800 Weak transcription Placenta Amnion Placenta Amnion
40 chr5:79975600-79983000 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr5:79975600-79983200 Weak transcription H1 Cell Line embryonic stem cell
42 chr5:79975600-80015200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr5:79975600-80022000 Weak transcription Rectal Smooth Muscle rectum
44 chr5:79975800-79983200 Weak transcription Brain Hippocampus Middle brain
45 chr5:79975800-79983200 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr5:79975800-79992000 Weak transcription Fetal Lung lung
47 chr5:79975800-79997000 Weak transcription Fetal Muscle Leg muscle
48 chr5:79975800-80002800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr5:79975800-80004400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr5:79975800-80007000 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015