Variant report

Variant rs6864142
Chromosome Location chr5:61032002-61032003
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:61027400-61032400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr5:61027800-61032400 Weak transcription H9 Cell Line embryonic stem cell
3 chr5:61029000-61032200 Weak transcription H1 Cell Line embryonic stem cell
4 chr5:61029000-61032200 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr5:61029000-61032200 Weak transcription Fetal Muscle Trunk muscle
6 chr5:61029000-61032400 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr5:61029000-61035800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:61029000-61040000 Weak transcription Pancreas Pancrea
9 chr5:61029200-61032200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:61029200-61032200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr5:61029200-61032400 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr5:61029400-61032200 Weak transcription Brain Cingulate Gyrus brain
13 chr5:61029400-61032200 Weak transcription Brain Substantia Nigra brain
14 chr5:61029400-61032400 Weak transcription Brain Hippocampus Middle brain
15 chr5:61029400-61032400 Weak transcription Fetal Stomach stomach
16 chr5:61029600-61032200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr5:61029800-61033200 Enhancers NHDF-Ad bronchial
18 chr5:61030000-61033600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr5:61030400-61032600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr5:61030600-61032200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr5:61030800-61033600 Enhancers Muscle Satellite Cultured Cells --
22 chr5:61031000-61032200 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr5:61031200-61033600 Enhancers HSMM muscle
24 chr5:61031400-61032600 Flanking Active TSS Liver Liver
25 chr5:61031400-61033000 Enhancers Fetal Brain Male brain
26 chr5:61031400-61033600 Enhancers Fetal Lung lung
27 chr5:61031400-61034000 Enhancers HSMMtube muscle
28 chr5:61031400-61034400 Enhancers Brain Anterior Caudate brain
29 chr5:61031600-61032800 Enhancers Brain Germinal Matrix brain
30 chr5:61031800-61033600 Enhancers Cortex derived primary cultured neurospheres brain
31 chr5:61031800-61033600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr5:61032000-61032400 Enhancers Lung lung
33 chr5:61032000-61032600 Active TSS Fetal Kidney kidney
34 chr5:61032000-61032600 Enhancers NH-A brain
35 chr5:61032000-61032800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
36 chr5:61032000-61033000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr5:61032000-61033200 Enhancers Brain Angular Gyrus brain
38 chr5:61032000-61033200 Enhancers Fetal Brain Female brain
39 chr5:61032000-61033200 Enhancers Fetal Intestine Small intestine
40 chr5:61032000-61033400 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr5:61032000-61033600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr5:61032000-61033600 Enhancers Placenta Placenta
43 chr5:61032000-61034000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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