Variant report

Variant rs6866952
Chromosome Location chr5:178051073-178051074
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178031800-178052800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:178035800-178052000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr5:178041600-178051200 Weak transcription Right Ventricle heart
4 chr5:178042200-178051400 Weak transcription Pancreas Pancrea
5 chr5:178043400-178051400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr5:178044000-178051400 Weak transcription Fetal Intestine Small intestine
7 chr5:178044000-178052000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr5:178044000-178052000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:178047000-178051200 Weak transcription Aorta Aorta
10 chr5:178047000-178051600 Weak transcription Placenta Amnion Placenta Amnion
11 chr5:178047000-178052000 Weak transcription Esophagus oesophagus
12 chr5:178047000-178052200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr5:178047200-178051200 Weak transcription Fetal Stomach stomach
14 chr5:178047200-178051400 Weak transcription Gastric stomach
15 chr5:178047200-178052000 Weak transcription H9 Cell Line embryonic stem cell
16 chr5:178047400-178051400 Weak transcription Spleen Spleen
17 chr5:178047400-178052000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr5:178047400-178052000 Weak transcription Lung lung
19 chr5:178047600-178051800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr5:178047800-178051200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr5:178048200-178051200 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr5:178048200-178051800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr5:178048400-178051200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr5:178048400-178051200 Weak transcription Fetal Muscle Trunk muscle
25 chr5:178048400-178051600 Weak transcription Colonic Mucosa Colon
26 chr5:178049600-178051200 Weak transcription Thymus Thymus
27 chr5:178049800-178051400 Enhancers Fetal Heart heart
28 chr5:178050000-178051200 Enhancers Colon Smooth Muscle Colon
29 chr5:178050000-178051200 Enhancers Skeletal Muscle Male skeletal muscle
30 chr5:178050000-178051400 Weak transcription H1 Cell Line embryonic stem cell
31 chr5:178050000-178051400 Enhancers Brain Angular Gyrus brain
32 chr5:178050000-178051400 Enhancers Brain Anterior Caudate brain
33 chr5:178050000-178051400 Enhancers Brain Germinal Matrix brain
34 chr5:178050200-178051200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:178050200-178051200 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr5:178050200-178051200 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr5:178050200-178051200 Weak transcription Fetal Brain Female brain
38 chr5:178050200-178051400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr5:178050200-178051400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr5:178050200-178051400 Weak transcription Fetal Intestine Large intestine
41 chr5:178050200-178051400 Weak transcription A549 lung
42 chr5:178050200-178051600 Genic enhancers Primary B cells from cord blood blood
43 chr5:178050200-178051600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr5:178050200-178051800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
45 chr5:178050200-178052000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr5:178050400-178051200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr5:178050400-178051200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr5:178050400-178051200 Weak transcription Primary monocytes fromperipheralblood blood
49 chr5:178050400-178051200 Enhancers Primary T helper cells fromperipheralblood blood
50 chr5:178050400-178051200 Weak transcription Brain Inferior Temporal Lobe brain

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