Variant report

Variant	rs6867007
Chromosome Location	chr5:35823782-35823783
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs6451222	0.98[AFR][1000 genomes]
rs7701176	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022761	chr5:35775802-35902546	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35816000-35829200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr5:35819000-35830200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
3	chr5:35819600-35835600	Enhancers	Primary T killer memory cells from peripheral blood	blood
4	chr5:35820000-35827800	Enhancers	Primary T cells fromperipheralblood	blood
5	chr5:35820000-35827800	Enhancers	Fetal Thymus	thymus
6	chr5:35820400-35824200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr5:35821800-35824000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
8	chr5:35821800-35824200	Flanking Active TSS	Primary T cells from cord blood	blood
9	chr5:35822000-35823800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
10	chr5:35822800-35828000	Enhancers	Thymus	Thymus
11	chr5:35822800-35830800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
12	chr5:35823000-35825400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
13	chr5:35823000-35826200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr5:35823000-35830600	Enhancers	Primary T helper cells fromperipheralblood	blood
15	chr5:35823600-35823800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
16	chr5:35823600-35825200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
17	chr5:35823600-35830800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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