Variant report

Variant	rs6876042
Chromosome Location	chr5:41637525-41637526
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12109484	1.00[AMR][1000 genomes]
rs55957622	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56347183	0.81[AMR][1000 genomes]
rs57536348	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57555512	0.81[AMR][1000 genomes]
rs58511292	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58783539	1.00[AMR][1000 genomes]
rs59074523	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59194359	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59365840	0.81[AMR][1000 genomes]
rs60432772	0.81[AMR][1000 genomes]
rs60491534	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61303374	0.81[AMR][1000 genomes]
rs6873842	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6897007	1.00[AMR][1000 genomes]
rs73076205	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73076279	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73078212	1.00[AMR][1000 genomes]
rs73087787	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73089508	0.81[AMR][1000 genomes]
rs73752207	0.81[AMR][1000 genomes]
rs73752214	0.81[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41637000-41637600	Weak transcription	Ovary	ovary
2	chr5:41637000-41637800	Enhancers	H1 Cell Line	embryonic stem cell
3	chr5:41637000-41638200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr5:41637000-41638400	Enhancers	Placenta	Placenta
5	chr5:41637200-41637600	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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