Variant report

Variant rs6877552
Chromosome Location chr5:147068247-147068248
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:147042000-147076800 Weak transcription H9 Cell Line embryonic stem cell
2 chr5:147051400-147070400 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr5:147051400-147076600 Weak transcription H1 Cell Line embryonic stem cell
4 chr5:147051600-147075600 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr5:147051600-147077000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr5:147051600-147078400 Weak transcription Primary T cells from cord blood blood
7 chr5:147051800-147076800 Weak transcription Primary hematopoietic stem cells blood
8 chr5:147060400-147072600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:147064000-147071400 Enhancers Cortex derived primary cultured neurospheres brain
10 chr5:147064200-147068400 Weak transcription Fetal Brain Female brain
11 chr5:147064400-147069600 Enhancers Brain Substantia Nigra brain
12 chr5:147065200-147071200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr5:147065400-147069800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr5:147065400-147070000 Enhancers Brain Angular Gyrus brain
15 chr5:147065400-147070000 Enhancers Brain Cingulate Gyrus brain
16 chr5:147066000-147068600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr5:147066000-147071200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr5:147066200-147068400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr5:147066200-147068800 Weak transcription NH-A brain
20 chr5:147066200-147070600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr5:147066600-147069600 Enhancers Fetal Lung lung
22 chr5:147066600-147071400 Enhancers Colon Smooth Muscle Colon
23 chr5:147067000-147070800 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr5:147067200-147068400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr5:147067400-147069800 Enhancers Brain Inferior Temporal Lobe brain
26 chr5:147067800-147068800 Enhancers Fetal Heart heart
27 chr5:147067800-147069400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr5:147067800-147069400 Enhancers Pancreatic Islets Pancreatic Islet
29 chr5:147067800-147071400 Enhancers Brain Hippocampus Middle brain
30 chr5:147068000-147069400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:147068200-147068600 Enhancers Brain Germinal Matrix brain
32 chr5:147068200-147068600 Flanking Active TSS Stomach Smooth Muscle stomach
33 chr5:147068200-147069400 Enhancers Brain Anterior Caudate brain
34 chr5:147068200-147069400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
35 chr5:147068200-147069400 Enhancers Fetal Stomach stomach
36 chr5:147068200-147069600 Enhancers Ovary ovary
37 chr5:147068200-147069800 Enhancers Fetal Brain Male brain
38 chr5:147068200-147069800 Enhancers Rectal Smooth Muscle rectum
39 chr5:147068200-147070000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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