The 2.0 version of rSNPBase

Variant report

Variant rs6878922
Chromosome Location chr5:127494824-127494825
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127441200-127536800 Weak transcription Colonic Mucosa Colon
2 chr5:127442400-127525000 Weak transcription Right Ventricle heart
3 chr5:127447000-127525000 Weak transcription Fetal Brain Male brain
4 chr5:127453600-127525400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr5:127457600-127534400 Weak transcription Pancreas Pancrea
6 chr5:127460800-127525200 Weak transcription Spleen Spleen
7 chr5:127463200-127533000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr5:127464800-127497600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr5:127465400-127532200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr5:127467200-127500600 Weak transcription Esophagus oesophagus
11 chr5:127467600-127525000 Weak transcription Thymus Thymus
12 chr5:127467800-127508000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr5:127468000-127536800 Weak transcription Fetal Brain Female brain
14 chr5:127469200-127524200 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr5:127469800-127504200 Weak transcription Fetal Heart heart
16 chr5:127471200-127515200 Weak transcription Brain Germinal Matrix brain
17 chr5:127471800-127499800 Weak transcription NHLF lung
18 chr5:127472400-127498800 Weak transcription Primary monocytes fromperipheralblood blood
19 chr5:127473600-127521800 Weak transcription Fetal Kidney kidney
20 chr5:127478000-127514400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr5:127478400-127500200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr5:127478400-127524600 Weak transcription Small Intestine intestine
23 chr5:127478600-127531600 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr5:127478800-127497600 Weak transcription NH-A brain
25 chr5:127479200-127532200 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr5:127480600-127501600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr5:127480600-127532400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr5:127480600-127534400 Weak transcription Gastric stomach
29 chr5:127482600-127499000 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr5:127483000-127499200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr5:127483000-127500200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr5:127483200-127495600 Strong transcription Rectal Mucosa Donor 31 rectum
33 chr5:127484200-127499000 Strong transcription Primary B cells from peripheral blood blood
34 chr5:127484400-127495400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr5:127485000-127536800 Weak transcription Colon Smooth Muscle Colon
36 chr5:127485800-127497800 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr5:127486800-127500000 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr5:127487600-127499800 Weak transcription Placenta Amnion Placenta Amnion
39 chr5:127488400-127495400 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr5:127488600-127499400 Weak transcription Placenta Placenta
41 chr5:127488600-127533200 Weak transcription Stomach Mucosa stomach
42 chr5:127488800-127497400 Weak transcription HSMMtube muscle
43 chr5:127488800-127499600 Weak transcription Muscle Satellite Cultured Cells --
44 chr5:127488800-127499600 Weak transcription HMEC breast
45 chr5:127488800-127505200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr5:127488800-127523600 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr5:127489400-127499600 Weak transcription Osteobl bone
48 chr5:127489800-127495000 Strong transcription HSMM muscle
49 chr5:127490000-127495800 Strong transcription Primary T cells from cord blood blood
50 chr5:127490400-127498400 Weak transcription Fetal Stomach stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015