Variant report

Variant	rs6878947
Chromosome Location	chr5:91713458-91713459
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10036746	0.88[ASN][1000 genomes]
rs4572981	0.88[ASN][1000 genomes]
rs62370166	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62370169	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62370170	0.97[EUR][1000 genomes]
rs62370174	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62370175	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62370176	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62370178	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6896089	0.84[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:91707800-91714000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr5:91708400-91714000	Weak transcription	A549	lung
3	chr5:91709200-91714400	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr5:91711000-91714800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr5:91713000-91715000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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