Variant report
| Variant | rs6883912 |
|---|---|
| Chromosome Location | chr5:58472369-58472370 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:58439000-58484000 | Weak transcription | Fetal Kidney | kidney |
| 2 | chr5:58447600-58473200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 3 | chr5:58447600-58473400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 4 | chr5:58447600-58479600 | Weak transcription | Left Ventricle | heart |
| 5 | chr5:58449400-58473600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 6 | chr5:58449800-58489400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr5:58454400-58472800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 8 | chr5:58455200-58473400 | Weak transcription | Fetal Muscle Leg | muscle |
| 9 | chr5:58455800-58473600 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 10 | chr5:58457800-58473400 | Weak transcription | Fetal Intestine Small | intestine |
| 11 | chr5:58459400-58473400 | Weak transcription | Fetal Stomach | stomach |
| 12 | chr5:58460000-58472600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 13 | chr5:58461000-58484200 | Weak transcription | HUVEC | blood vessel |
| 14 | chr5:58464200-58484000 | Weak transcription | Brain Anterior Caudate | brain |
| 15 | chr5:58464200-58485400 | Weak transcription | Aorta | Aorta |
| 16 | chr5:58464400-58473000 | Weak transcription | Right Ventricle | heart |
| 17 | chr5:58464600-58474400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 18 | chr5:58464800-58478800 | Weak transcription | Hela-S3 | cervix |
| 19 | chr5:58466000-58472800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 20 | chr5:58466000-58473600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 21 | chr5:58466200-58473600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 22 | chr5:58466200-58474400 | Weak transcription | Colon Smooth Muscle | Colon |
| 23 | chr5:58466200-58479400 | Weak transcription | Psoas Muscle | Psoas |
| 24 | chr5:58467200-58474800 | Weak transcription | Esophagus | oesophagus |
| 25 | chr5:58469000-58483800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 26 | chr5:58469200-58484400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 27 | chr5:58469800-58473600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 28 | chr5:58469800-58477000 | Genic enhancers | A549 | lung |
| 29 | chr5:58469800-58478400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 30 | chr5:58470000-58472800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 31 | chr5:58470000-58472800 | Weak transcription | Fetal Intestine Large | intestine |
| 32 | chr5:58470000-58473800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 33 | chr5:58470000-58483400 | Weak transcription | Fetal Lung | lung |
| 34 | chr5:58470200-58473200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 35 | chr5:58470200-58481400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 36 | chr5:58470600-58480600 | Weak transcription | Fetal Heart | heart |
| 37 | chr5:58470600-58482000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 38 | chr5:58470600-58483800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 39 | chr5:58470800-58472800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 40 | chr5:58471000-58479000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 41 | chr5:58471000-58483600 | Weak transcription | Brain Angular Gyrus | brain |
| 42 | chr5:58471000-58483800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 43 | chr5:58471000-58484800 | Weak transcription | Pancreas | Pancrea |
| 44 | chr5:58471400-58473600 | Weak transcription | Fetal Brain Female | brain |
| 45 | chr5:58471600-58484200 | Weak transcription | Brain Germinal Matrix | brain |
| 46 | chr5:58472000-58479000 | Weak transcription | Gastric | stomach |
| 47 | chr5:58472000-58484400 | Weak transcription | Primary B cells from cord blood | blood |
| 48 | chr5:58472200-58474200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 49 | chr5:58472200-58475200 | Weak transcription | Colonic Mucosa | Colon |
| 50 | chr5:58472200-58485800 | Weak transcription | Stomach Mucosa | stomach |
