Variant report

Variant rs6887384
Chromosome Location chr5:177651040-177651041
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:177634400-177654200 Strong transcription Fetal Stomach stomach
2 chr5:177635800-177657000 Strong transcription Primary T regulatory cells fromperipheralblood blood
3 chr5:177636000-177654000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr5:177639400-177657600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr5:177640400-177655600 Weak transcription Right Atrium heart
6 chr5:177642600-177654200 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr5:177643400-177651600 Weak transcription HSMMtube muscle
8 chr5:177643400-177656400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr5:177643600-177654400 Weak transcription Aorta Aorta
10 chr5:177643600-177655200 Weak transcription Stomach Mucosa stomach
11 chr5:177643800-177652200 Strong transcription Liver Liver
12 chr5:177643800-177653800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr5:177644000-177651400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr5:177644200-177654800 Weak transcription NHDF-Ad bronchial
15 chr5:177645400-177651400 Strong transcription Rectal Mucosa Donor 31 rectum
16 chr5:177645400-177651600 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr5:177645400-177654800 Strong transcription Hela-S3 cervix
18 chr5:177645400-177656800 Strong transcription Primary B cells from peripheral blood blood
19 chr5:177645400-177656800 Strong transcription Dnd41 blood
20 chr5:177645600-177654800 Weak transcription HSMM muscle
21 chr5:177646000-177651400 Weak transcription NH-A brain
22 chr5:177646000-177654400 Weak transcription Colon Smooth Muscle Colon
23 chr5:177646200-177654000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr5:177646200-177657000 Weak transcription Fetal Brain Male brain
25 chr5:177646400-177652000 Weak transcription Muscle Satellite Cultured Cells --
26 chr5:177646600-177653000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:177646600-177657400 Strong transcription Thymus Thymus
28 chr5:177646800-177654400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:177646800-177658000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr5:177647400-177652400 Strong transcription Primary T helper naive cells fromperipheralblood blood
31 chr5:177647600-177653200 Strong transcription A549 lung
32 chr5:177647600-177654400 Genic enhancers Fetal Intestine Small intestine
33 chr5:177647800-177652600 Strong transcription Stomach Smooth Muscle stomach
34 chr5:177647800-177653000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
35 chr5:177647800-177657000 Strong transcription Brain Germinal Matrix brain
36 chr5:177648000-177651600 Genic enhancers Fetal Muscle Leg muscle
37 chr5:177648000-177654400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr5:177648000-177656000 Strong transcription Placenta Amnion Placenta Amnion
39 chr5:177648000-177656800 Strong transcription Primary B cells from cord blood blood
40 chr5:177648000-177658000 Strong transcription Fetal Thymus thymus
41 chr5:177648200-177651200 Genic enhancers Lung lung
42 chr5:177648200-177651400 Strong transcription Esophagus oesophagus
43 chr5:177648200-177653000 Strong transcription Brain Anterior Caudate brain
44 chr5:177648200-177654800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:177648200-177657000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr5:177648200-177657000 Strong transcription NHLF lung
47 chr5:177648200-177657400 Strong transcription Fetal Brain Female brain
48 chr5:177648200-177657800 Genic enhancers Fetal Intestine Large intestine
49 chr5:177648400-177654600 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr5:177648400-177654800 Strong transcription NHEK skin

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