Variant report

Variant rs6888090
Chromosome Location chr5:146948359-146948360
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146940200-146952200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:146944000-146948400 Weak transcription Fetal Muscle Leg muscle
3 chr5:146945200-146948800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr5:146945600-146957400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr5:146946200-146949800 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr5:146946600-146948800 Enhancers H1 Cell Line embryonic stem cell
7 chr5:146946800-146948600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr5:146946800-146948600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr5:146946800-146948800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr5:146946800-146956800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr5:146947200-146948400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr5:146947200-146948400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr5:146947200-146948400 Enhancers NH-A brain
14 chr5:146947200-146948600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr5:146947400-146948400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
16 chr5:146947400-146948400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
17 chr5:146947400-146948800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
18 chr5:146947600-146948600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr5:146947600-146948600 Enhancers Fetal Thymus thymus
20 chr5:146947800-146948400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
21 chr5:146947800-146948600 Enhancers Adipose Nuclei Adipose
22 chr5:146947800-146949400 Enhancers H9 Cell Line embryonic stem cell
23 chr5:146948000-146949000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
24 chr5:146948200-146948600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:146948200-146948600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr5:146948200-146949200 Enhancers HUES64 Cell Line embryonic stem cell
27 chr5:146948200-146949600 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr5:146948200-146950200 Genic enhancers HUES48 Cell Line embryonic stem cell

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