Variant report

Variant	rs6888863
Chromosome Location	chr5:35435047-35435048
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs16902021	1.00[ASW][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16902024	1.00[ASW][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6867993	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6881409	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73747430	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs73747431	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35431600-35436600	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr5:35431800-35437800	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr5:35434800-35437400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links