Variant report

Variant	rs6891303
Chromosome Location	chr5:75787783-75787784
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:75785398..75787925-chr5:75797888..75800417,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10035371	0.84[ASN][1000 genomes]
rs13153728	0.83[ASN][1000 genomes]
rs13154264	0.82[ASN][1000 genomes]
rs13158404	0.83[ASN][1000 genomes]
rs13172341	0.82[ASN][1000 genomes]
rs4516832	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6877305	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7711417	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022032	chr5:75785106-75914003	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:75769600-75816600	Weak transcription	Primary B cells from cord blood	blood
2	chr5:75776200-75801000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr5:75776400-75791200	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr5:75776400-75800200	Weak transcription	Primary T cells from cord blood	blood
5	chr5:75776800-75791000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr5:75778400-75793200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr5:75780400-75788000	Weak transcription	Primary T cells fromperipheralblood	blood
8	chr5:75780800-75793400	Weak transcription	Small Intestine	intestine
9	chr5:75783800-75788200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr5:75783800-75788800	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr5:75784000-75788800	Weak transcription	K562	blood
12	chr5:75784000-75791600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
13	chr5:75784200-75789200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr5:75784400-75789400	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr5:75784400-75789800	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr5:75784600-75788600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr5:75785000-75787800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr5:75785800-75787800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr5:75785800-75789800	Enhancers	Stomach Mucosa	stomach
20	chr5:75786000-75788000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr5:75786000-75788000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
22	chr5:75786000-75789000	Enhancers	Duodenum Mucosa	Duodenum
23	chr5:75786000-75790800	Enhancers	HepG2	liver
24	chr5:75786200-75788200	Enhancers	Rectal Mucosa Donor 29	rectum
25	chr5:75786200-75788800	Enhancers	iPS-18 Cell Line	embryonic stem cell
26	chr5:75786200-75789400	Enhancers	HUES6 Cell Line	embryonic stem cell
27	chr5:75786200-75789400	Enhancers	Rectal Mucosa Donor 31	rectum
28	chr5:75786400-75787800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr5:75786400-75787800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr5:75786400-75787800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
31	chr5:75786400-75789000	Enhancers	HUES48 Cell Line	embryonic stem cell
32	chr5:75786400-75790800	Enhancers	iPS-20b Cell Line	embryonic stem cell
33	chr5:75786400-75819800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
34	chr5:75786600-75789600	Enhancers	Liver	Liver
35	chr5:75786800-75789200	Weak transcription	Fetal Intestine Small	intestine
36	chr5:75786800-75790200	Weak transcription	Cortex derived primary cultured neurospheres	brain
37	chr5:75786800-75793600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
38	chr5:75786800-75793600	Weak transcription	Fetal Lung	lung
39	chr5:75787000-75788200	Weak transcription	Fetal Kidney	kidney
40	chr5:75787000-75790400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr5:75787000-75793400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
42	chr5:75787200-75788000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
43	chr5:75787200-75789200	Enhancers	H1 Cell Line	embryonic stem cell
44	chr5:75787200-75791600	Weak transcription	Primary T helper cells fromperipheralblood	blood
45	chr5:75787400-75787800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr5:75787400-75787800	Weak transcription	Primary T helper cells PMA-I stimulated	--
47	chr5:75787400-75789400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
48	chr5:75787400-75789400	Enhancers	Placenta	Placenta
49	chr5:75787400-75789400	Enhancers	Pancreas	Pancrea
50	chr5:75787400-75792400	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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