Variant report

Variant rs6900800
Chromosome Location chr6:167004416-167004417
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:166989000-167011400 Weak transcription Ovary ovary
2 chr6:166995000-167008400 Weak transcription Placenta Amnion Placenta Amnion
3 chr6:166997200-167006000 Weak transcription Aorta Aorta
4 chr6:166998000-167011200 Weak transcription Stomach Smooth Muscle stomach
5 chr6:167000200-167004600 Enhancers Primary B cells from peripheral blood blood
6 chr6:167000600-167004600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr6:167000800-167006200 Enhancers Fetal Heart heart
8 chr6:167001200-167004800 Enhancers Fetal Muscle Trunk muscle
9 chr6:167001400-167004800 Enhancers Brain Anterior Caudate brain
10 chr6:167001800-167004600 Enhancers Primary neutrophils fromperipheralblood blood
11 chr6:167001800-167004600 Enhancers Skeletal Muscle Male skeletal muscle
12 chr6:167001800-167005000 Enhancers Skeletal Muscle Female skeletal muscle
13 chr6:167001800-167005400 Enhancers Cortex derived primary cultured neurospheres brain
14 chr6:167002200-167005200 Enhancers Left Ventricle heart
15 chr6:167002200-167005400 Enhancers Right Ventricle heart
16 chr6:167002200-167006600 Enhancers Psoas Muscle Psoas
17 chr6:167002400-167004800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr6:167002600-167005400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr6:167002600-167011400 Weak transcription Right Atrium heart
20 chr6:167002600-167013200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr6:167003000-167009000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr6:167003000-167010400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr6:167003000-167010800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr6:167003200-167004800 Enhancers Primary B cells from cord blood blood
25 chr6:167003200-167004800 Enhancers Esophagus oesophagus
26 chr6:167003200-167006400 Weak transcription Primary T cells from cord blood blood
27 chr6:167003200-167009600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr6:167003200-167011200 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr6:167003200-167011200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr6:167003400-167004600 Enhancers GM12878-XiMat blood
31 chr6:167003400-167005800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:167003400-167005800 Enhancers Lung lung
33 chr6:167003400-167009000 Weak transcription Colon Smooth Muscle Colon
34 chr6:167003600-167004600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:167003600-167005400 Weak transcription HSMMtube muscle
36 chr6:167003600-167008200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:167003600-167008200 Weak transcription NHDF-Ad bronchial
38 chr6:167003600-167008800 Weak transcription HMEC breast
39 chr6:167003600-167010400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr6:167003600-167011600 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr6:167003600-167013000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr6:167003800-167004600 Weak transcription NHLF lung
43 chr6:167003800-167004800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr6:167003800-167005000 Enhancers Pancreas Pancrea
45 chr6:167003800-167005400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr6:167003800-167008800 Weak transcription Rectal Smooth Muscle rectum
47 chr6:167003800-167009000 Weak transcription Duodenum Mucosa Duodenum
48 chr6:167004000-167008200 Weak transcription HSMM muscle
49 chr6:167004000-167009000 Weak transcription Brain Hippocampus Middle brain
50 chr6:167004000-167009200 Weak transcription Brain Cingulate Gyrus brain

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