Variant report

Variant	rs6902581
Chromosome Location	chr6:145689259-145689260
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10484701	0.95[ASN][1000 genomes]
rs11155414	0.98[ASN][1000 genomes]
rs12190268	0.98[ASN][1000 genomes]
rs12192540	0.95[ASN][1000 genomes]
rs12196549	0.98[ASN][1000 genomes]
rs12203531	0.98[ASN][1000 genomes]
rs12204968	0.98[ASN][1000 genomes]
rs12205338	0.98[ASN][1000 genomes]
rs12208257	0.98[ASN][1000 genomes]
rs12208709	0.98[ASN][1000 genomes]
rs12210074	0.98[ASN][1000 genomes]
rs12215422	0.98[ASN][1000 genomes]
rs12215687	0.98[ASN][1000 genomes]
rs13201024	0.98[ASN][1000 genomes]
rs13211401	0.95[ASN][1000 genomes]
rs13213905	0.98[ASN][1000 genomes]
rs13219674	0.98[ASN][1000 genomes]
rs1832375	0.98[ASN][1000 genomes]
rs1856270	0.98[ASN][1000 genomes]
rs34612213	0.98[ASN][1000 genomes]
rs34658504	0.98[ASN][1000 genomes]
rs7452286	0.98[ASN][1000 genomes]
rs7739067	0.98[ASN][1000 genomes]
rs7746939	0.98[ASN][1000 genomes]
rs7748655	0.98[ASN][1000 genomes]
rs7752263	0.93[ASN][1000 genomes]
rs7764645	0.98[ASN][1000 genomes]
rs7765055	0.98[ASN][1000 genomes]
rs9285507	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017166	chr6:145677071-145808448	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145688400-145692800	Weak transcription	GM12878-XiMat	blood
2	chr6:145688600-145689600	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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