Variant report

Variant	rs6903934
Chromosome Location	chr6:142547297-142547298
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17071594	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2232295	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73777114	0.92[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:142535000-142548800	Weak transcription	NH-A	brain
2	chr6:142535200-142548800	Weak transcription	Left Ventricle	heart
3	chr6:142535200-142552800	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr6:142535800-142553400	Weak transcription	Thymus	Thymus
5	chr6:142536000-142552800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
6	chr6:142540200-142548400	Weak transcription	Placenta	Placenta
7	chr6:142541200-142552800	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr6:142541200-142553200	Weak transcription	Primary T cells fromperipheralblood	blood
9	chr6:142541200-142553400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr6:142541400-142552800	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr6:142541800-142550600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr6:142541800-142553200	Weak transcription	HepG2	liver
13	chr6:142542400-142547600	Weak transcription	Fetal Thymus	thymus
14	chr6:142542400-142550400	Weak transcription	Primary B cells from cord blood	blood
15	chr6:142542800-142553600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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