The 2.0 version of rSNPBase

Variant report

Variant rs6909128
Chromosome Location chr6:49420758-49420759
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:49395400-49429800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:49396000-49420800 Strong transcription Liver Liver
3 chr6:49396000-49427400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr6:49396400-49429400 Weak transcription Stomach Mucosa stomach
5 chr6:49397000-49425800 Strong transcription Primary monocytes fromperipheralblood blood
6 chr6:49397000-49426600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr6:49397200-49421200 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr6:49397400-49425600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr6:49397400-49426000 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr6:49398200-49429600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr6:49398400-49425600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr6:49398400-49427200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr6:49399800-49420800 Weak transcription H1 Cell Line embryonic stem cell
14 chr6:49401000-49422600 Weak transcription GM12878-XiMat blood
15 chr6:49403000-49428800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:49403400-49429600 Weak transcription NHEK skin
17 chr6:49404200-49429600 Weak transcription Right Ventricle heart
18 chr6:49405000-49423200 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr6:49406800-49430400 Weak transcription Esophagus oesophagus
20 chr6:49407600-49428800 Weak transcription Muscle Satellite Cultured Cells --
21 chr6:49407800-49430400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr6:49407800-49430400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:49407800-49430400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr6:49407800-49430400 Weak transcription Lung lung
25 chr6:49408000-49428200 Weak transcription Fetal Brain Male brain
26 chr6:49408000-49429200 Weak transcription Thymus Thymus
27 chr6:49408000-49430400 Weak transcription Gastric stomach
28 chr6:49408200-49428000 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr6:49408200-49429400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:49408200-49429600 Weak transcription Hela-S3 cervix
31 chr6:49408400-49422400 Weak transcription Spleen Spleen
32 chr6:49408600-49422000 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr6:49408600-49429600 Weak transcription K562 blood
34 chr6:49408800-49429200 Weak transcription Small Intestine intestine
35 chr6:49408800-49429400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr6:49408800-49429600 Weak transcription HSMMtube muscle
37 chr6:49408800-49430000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr6:49409000-49421800 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr6:49409000-49426200 Weak transcription NHLF lung
40 chr6:49409000-49429600 Weak transcription Brain Cingulate Gyrus brain
41 chr6:49409200-49424600 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr6:49409200-49430400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr6:49409600-49429600 Weak transcription Colonic Mucosa Colon
44 chr6:49410400-49430400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr6:49411200-49422000 Weak transcription Left Ventricle heart
46 chr6:49411200-49428800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr6:49412000-49429200 Weak transcription Psoas Muscle Psoas
48 chr6:49412000-49429600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr6:49412400-49421800 Weak transcription Colon Smooth Muscle Colon
50 chr6:49412600-49422000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015