Variant report

Variant rs6912472
Chromosome Location chr6:45516961-45516962
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:45465000-45521600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr6:45489000-45521800 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr6:45506800-45523400 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr6:45507400-45518800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:45508200-45517200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr6:45508200-45521600 Weak transcription Primary T cells from cord blood blood
7 chr6:45508200-45530600 Weak transcription Psoas Muscle Psoas
8 chr6:45508600-45522400 Weak transcription Fetal Thymus thymus
9 chr6:45508800-45523400 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr6:45512000-45524000 Weak transcription NHEK skin
11 chr6:45512200-45517200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr6:45512400-45523400 Weak transcription Brain Substantia Nigra brain
13 chr6:45512400-45523400 Weak transcription HMEC breast
14 chr6:45512600-45519400 Weak transcription Fetal Stomach stomach
15 chr6:45512600-45521600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr6:45512800-45520200 Weak transcription Ovary ovary
17 chr6:45513800-45517200 Strong transcription Primary monocytes fromperipheralblood blood
18 chr6:45514000-45517000 Weak transcription Spleen Spleen
19 chr6:45514200-45517200 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr6:45514400-45517200 Strong transcription Primary T regulatory cells fromperipheralblood blood
21 chr6:45514400-45517800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
22 chr6:45514600-45517000 Strong transcription Dnd41 blood
23 chr6:45515000-45521600 Weak transcription Gastric stomach
24 chr6:45515400-45518400 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr6:45515400-45522400 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr6:45515400-45523400 Weak transcription HSMMtube muscle
27 chr6:45515600-45517200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr6:45515600-45520600 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr6:45515600-45521200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr6:45515600-45521600 Weak transcription Primary T cells fromperipheralblood blood
31 chr6:45515600-45521600 Weak transcription Esophagus oesophagus
32 chr6:45515600-45521800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr6:45515600-45521800 Weak transcription Primary hematopoietic stem cells blood
34 chr6:45515800-45518800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr6:45515800-45522600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:45516000-45519800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr6:45516000-45521800 Weak transcription NH-A brain
38 chr6:45516200-45517000 Enhancers Primary B cells from peripheral blood blood
39 chr6:45516200-45517200 Enhancers GM12878-XiMat blood
40 chr6:45516200-45517400 Enhancers Duodenum Mucosa Duodenum
41 chr6:45516200-45517400 Enhancers Hela-S3 cervix
42 chr6:45516400-45517200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr6:45516400-45517200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:45516400-45517200 Enhancers Liver Liver
45 chr6:45516400-45517200 Enhancers HepG2 liver
46 chr6:45516400-45517400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr6:45516600-45517000 Enhancers Fetal Intestine Small intestine
48 chr6:45516600-45517000 Enhancers Rectal Mucosa Donor 31 rectum
49 chr6:45516600-45517000 Enhancers Small Intestine intestine
50 chr6:45516600-45517000 Enhancers Stomach Mucosa stomach

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