Variant report

Variant	rs6913683
Chromosome Location	chr6:24389433-24389434
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:24382936..24386801-chr6:24387584..24390590,3	K562	blood:
2	chr6:24282956..24283866-chr6:24389181..24390147,5	K562	blood:
3	chr6:24282939..24284070-chr6:24389118..24390156,6	MCF-7	breast:
4	chr6:24388493..24391215-chr6:24394249..24397019,3	K562	blood:
5	chr6:24388493..24392053-chr6:24395083..24398329,4	K562	blood:
6	chr6:24384186..24386194-chr6:24388139..24390606,2	MCF-7	breast:
7	chr6:24283208..24284031-chr6:24389181..24390289,7	MCF-7	breast:
8	chr6:24355437..24359973-chr6:24386139..24390174,5	MCF-7	breast:
9	chr6:24282327..24284460-chr6:24388227..24391209,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1277347	1.00[AMR][1000 genomes]
rs1277349	1.00[EUR][1000 genomes]
rs2753926	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2793421	1.00[AMR][1000 genomes]
rs6912310	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7775021	0.83[EUR][1000 genomes]
rs793655	1.00[AMR][1000 genomes]
rs793678	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs793718	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026638	chr6:24347972-24475300	Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24386400-24391200	Enhancers	HepG2	liver
2	chr6:24389200-24389800	Active TSS	A549	lung
3	chr6:24389200-24389800	Active TSS	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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