Variant report

Variant	rs6918728
Chromosome Location	chr6:139871866-139871867
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:139870901..139873058-chr6:139877273..139879607,2	K562	blood:
2	chr6:139865987..139868229-chr6:139871815..139875334,5	K562	blood:
3	chr6:139859429..139861277-chr6:139870175..139873280,3	MCF-7	breast:
4	chr6:139694563..139698514-chr6:139869572..139871998,3	MCF-7	breast:
5	chr6:139691015..139698508-chr6:139861148..139873542,28	MCF-7	breast:
6	chr6:139865978..139869184-chr6:139871132..139874040,4	MCF-7	breast:
7	chr6:139871534..139873291-chr6:139890773..139893208,2	MCF-7	breast:
8	chr6:139867825..139870142-chr6:139870145..139872588,2	MCF-7	breast:
9	chr6:139870741..139873086-chr6:139878054..139879982,2	MCF-7	breast:
10	chr6:139865987..139868229-chr6:139871815..139875267,4	K562	blood:

No data

No data

No data

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs9495532	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869066	chr6:139777114-140639695	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139859800-139876600	Weak transcription	Pancreas	Pancrea
2	chr6:139863200-139876200	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr6:139866400-139892000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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