Variant report

Variant	rs6923325
Chromosome Location	chr6:6191460-6191461
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7756161	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883421	chr6:6163492-6574384	Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv883422	chr6:6163492-6769930	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:6146800-6200400	Weak transcription	Placenta	Placenta
2	chr6:6179400-6195000	Weak transcription	Adipose Nuclei	Adipose
3	chr6:6180600-6191600	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr6:6181600-6193000	Weak transcription	HSMM	muscle
5	chr6:6182600-6191600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr6:6185400-6191600	Weak transcription	HSMMtube	muscle
7	chr6:6191400-6191800	Active TSS	HUES6 Cell Line	embryonic stem cell
8	chr6:6191400-6192000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
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