Variant report
Variant | rs6927636 |
---|---|
Chromosome Location | chr6:36366123-36366124 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:3 , 50 per page) page:
1
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000112078 | Chromatin interaction |
ENSG00000179165 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs1830577 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs2395650 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4486005 | 1.00[YRI][hapmap] |
rs4713969 | 1.00[YRI][hapmap] |
rs4713971 | 0.91[EUR][1000 genomes] |
rs6900093 | 1.00[CEU][hapmap];0.92[EUR][1000 genomes] |
rs6906529 | 0.91[EUR][1000 genomes] |
rs7764323 | 1.00[YRI][hapmap] |
rs9368927 | 0.91[EUR][1000 genomes] |
rs9470268 | 0.91[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv885806 | chr6:36349890-36621178 | Flanking Bivalent TSS/Enh Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 103 gene(s) | inside rSNPs | diseases |